RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 MUTYHQ9UIF7 546 aa11.8□□□□□ -0.52
HTT-213ENST00000513806 SALL4Q9UJQ4 1053 aa11.8□□□□□ -0.52
HTT-213ENST00000513806 ANAPC7Q9UJX3 599 aa11.8□□□□□ -0.52
HTT-213ENST00000513806 SH3BP1Q9Y3L3 701 aa11.8□□□□□ -0.52
HTT-213ENST00000513806 ZFP37Q9Y6Q3 630 aaPredicted RBP11.8□□□□□ -0.52
HTT-213ENST00000513806 DUSP10Q9Y6W6 482 aa11.8□□□□□ -0.52
HTT-213ENST00000513806 DOCK4Q8N1I0 1966 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 TMEM191CA6NGB0 347 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 I6L893 689 aaPredicted RBP11.79□□□□□ -0.52
HTT-213ENST00000513806 ECI2O75521 394 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 TMEM253P0C7T8 217 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 MYBL1P10243 752 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 PSMA2P25787 234 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 WEE1P30291 646 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 SDC4P31431 198 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 DEUP1Q05D60 604 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 SPA17Q15506 151 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 TRIP4Q15650 581 aaPredicted RBP11.79□□□□□ -0.52
HTT-213ENST00000513806 SLC25A52Q3SY17 297 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 KLHDC10Q6PID8 442 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 TADA2BQ86TJ2 420 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 FAM131BQ86XD5 332 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 MFSD6LQ8IWD5 586 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 GJD3Q8N144 294 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 SLC44A3Q8N4M1 653 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 ZNF276Q8N554 614 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 ARFGAP1Q8N6T3 406 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 SLC35G2Q8TBE7 412 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 ZNF564Q8TBZ8 553 aaPredicted RBP11.79□□□□□ -0.52
HTT-213ENST00000513806 BHMTQ93088 406 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 RNF34Q969K3 372 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 MYEOVQ96EZ4 313 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 TRIM11Q96F44 468 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 SLC39A13Q96H72 371 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 CDK5RAP1Q96SZ6 601 aaKnown RBP11.79□□□□□ -0.52
HTT-213ENST00000513806 LACRTQ9GZZ8 138 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 GOLPH3Q9H4A6 298 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 EBF3Q9H4W6 596 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 HYOU1Q9Y4L1 999 aa11.79□□□□□ -0.52
HTT-213ENST00000513806 OTOL1A6NHN0 477 aaPredicted RBP11.78□□□□□ -0.52
HTT-213ENST00000513806 BUB1O43683 1085 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 TSPAN3O60637 253 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 IGLV3-27P01718 113 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 PFKLP17858 780 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 PSMC3P17980 439 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 SLC6A4P31645 630 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 SOX9P48436 509 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 SGSHP51688 502 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 HDAC4P56524 1084 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 CCDC173Q0VFZ6 552 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 EIF4EBP2Q13542 120 aaPredicted RBP11.78□□□□□ -0.52
HTT-213ENST00000513806 NAIF1Q69YI7 327 aaPredicted RBP11.78□□□□□ -0.52
HTT-213ENST00000513806 NADSYN1Q6IA69 706 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 PPP1R2P3Q6NXS1 205 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 SCYL2Q6P3W7 929 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 RFWD3Q6PCD5 774 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 Q6ZNB5 142 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 BEND5Q7L4P6 421 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 KIAA1328Q86T90 577 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 YAF2Q8IY57 180 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 CCDC185Q8N715 623 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 NT5C3BQ969T7 300 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 SERPINB11Q96P15 392 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 PEBP4Q96S96 227 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 PPP1R9BQ96SB3 815 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 UHRF1Q96T88 793 aaPredicted RBP11.78□□□□□ -0.52
HTT-213ENST00000513806 TRMT61BQ9BVS5 477 aaKnown RBP11.78□□□□□ -0.52
HTT-213ENST00000513806 KIF9Q9HAQ2 790 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 HPS4Q9NQG7 708 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 GPATCH2LQ9NWQ4 482 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 DUS2Q9NX74 493 aaKnown RBP11.78□□□□□ -0.52
HTT-213ENST00000513806 GTSE1Q9NYZ3 720 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 AGO1Q9UL18 857 aaKnown RBP11.78□□□□□ -0.52
HTT-213ENST00000513806 STAP1Q9ULZ2 295 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 HBS1LQ9Y450 684 aaKnown RBP11.78□□□□□ -0.52
HTT-213ENST00000513806 SCINQ9Y6U3 715 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 KIAA1549LQ6ZVL6 1849 aa11.78□□□□□ -0.52
HTT-213ENST00000513806 SOBPA7XYQ1 873 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 ARHGAP6O43182 974 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 GBP1P32455 592 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 RDXP35241 583 aaKnown RBP11.77□□□□□ -0.53
HTT-213ENST00000513806 PTPN9P43378 593 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 NOP2P46087 812 aaKnown RBP11.77□□□□□ -0.53
HTT-213ENST00000513806 IFNAR2P48551 515 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 IRAK1P51617 712 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 ZNF143P52747 638 aaPredicted RBP11.77□□□□□ -0.53
HTT-213ENST00000513806 COG7P83436 770 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 MESDQ14696 234 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 EML3Q32P44 896 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 RAP1GAP2Q684P5 730 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 TXNRD3NBQ6F5E7 133 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 TPGS1Q6ZTW0 290 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 BNIPLQ7Z465 357 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 C14orf80Q86SX3 495 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 CCDC112Q8NEF3 446 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 OSCP1Q8WVF1 389 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 PLD4Q96BZ4 506 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 TRIM62Q9BVG3 475 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 TKTL2Q9H0I9 626 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms