RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 CACTIN-AS1Q8N1I8 211 aa12.69□□□□□ -0.38
PTPN20-229ENST00000513756 BIRC7Q96CA5 298 aa12.69□□□□□ -0.38
PTPN20-229ENST00000513756 ARID3AQ99856 593 aa12.69□□□□□ -0.38
PTPN20-229ENST00000513756 FBRSQ9HAH7 460 aa12.69□□□□□ -0.38
PTPN20-229ENST00000513756 NXF1Q9UBU9 619 aaKnown RBP12.69□□□□□ -0.38
PTPN20-229ENST00000513756 CCDC39Q9UFE4 941 aa12.69□□□□□ -0.38
PTPN20-229ENST00000513756 CKAP5Q14008 2032 aa12.69□□□□□ -0.38
PTPN20-229ENST00000513756 B8ZZF3 427 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 H3BQV1 296 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 VILLO15195 856 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 STAU1O95793 577 aaKnown RBP12.68□□□□□ -0.38
PTPN20-229ENST00000513756 CYBBP04839 570 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 DLATP10515 647 aaKnown RBP12.68□□□□□ -0.38
PTPN20-229ENST00000513756 IDEP14735 1019 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 PRKCHP24723 683 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 ATICP31939 592 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 ACADVLP49748 655 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 CASP5P51878 434 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 TMPRSS3P57727 454 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 RACK1P63244 317 aaKnown RBP12.68□□□□□ -0.38
PTPN20-229ENST00000513756 ZBTB16Q05516 673 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 DNAJC3Q13217 504 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 TBC1D25Q3MII6 688 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 KCNT1Q5JUK3 1230 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 FYB2Q5VWT5 728 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 FBXL19Q6PCT2 694 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 LAYNQ6UX15 382 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 PAQR9Q6ZVX9 377 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 USP49Q70CQ1 688 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 CBWD2Q8IUF1 395 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 FAM181AQ8N9Y4 354 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 SYAP1Q96A49 352 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-229ENST00000513756 DNAJC19Q96DA6 116 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 PIWIL1Q96J94 861 aaKnown RBP12.68□□□□□ -0.38
PTPN20-229ENST00000513756 LGMNQ99538 433 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 ELF4Q99607 663 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-229ENST00000513756 DCLK3Q9C098 648 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 CIPCQ9C0C6 399 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 SGK2Q9HBY8 427 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 SCML2Q9UQR0 700 aa12.68□□□□□ -0.38
PTPN20-229ENST00000513756 DNTTP04053 509 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 RARGP13631 454 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 C6P13671 934 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 PGFP49763 221 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 CLDN6P56747 220 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 CAMK2GQ13555 558 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-229ENST00000513756 TTC31Q49AM3 519 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-229ENST00000513756 PKDCCQ504Y2 493 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 C10orf120Q5SQS8 335 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 RRAGBQ5VZM2 374 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 GATAD2AQ86YP4 633 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 ZNF248Q8NDW4 579 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 CDK5RAP1Q96SZ6 601 aaKnown RBP12.67□□□□□ -0.38
PTPN20-229ENST00000513756 CGRRF1Q99675 332 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 SLC2A11Q9BYW1 496 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 CSNK1G1Q9HCP0 422 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 HSPBP1Q9NZL4 362 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 PLA2G4CQ9UP65 541 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 NUMA1Q14980 2115 aa12.67□□□□□ -0.38
PTPN20-229ENST00000513756 MYLKQ15746 1914 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 STC2O76061 302 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 WISP1O95388 367 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 C7P10643 843 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 TRIM21P19474 475 aaKnown RBP12.66□□□□□ -0.38
PTPN20-229ENST00000513756 GLDCP23378 1020 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 MAP3K7CLP57077 242 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 COG7P83436 770 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 GRIN1Q05586 938 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 SNRNP35Q16560 246 aaKnown RBP12.66□□□□□ -0.38
PTPN20-229ENST00000513756 FNDC3BQ53EP0 1204 aaKnown RBP12.66□□□□□ -0.38
PTPN20-229ENST00000513756 ERICH1Q86X53 443 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 FMNL3Q8IVF7 1028 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 FUKQ8N0W3 1084 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 EID2Q8N6I1 236 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 ZMIZ2Q8NF64 920 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 SAP25Q8TEE9 199 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 SORCS1Q8WY21 1168 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 TSC1Q92574 1164 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 GOLGA1Q92805 767 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 SMOQ99835 787 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 PANK4Q9NVE7 773 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTPN20-229ENST00000513756 OSER1Q9NX31 292 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 CLCA2Q9UQC9 943 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 NCKAP1Q9Y2A7 1128 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 PCDHA5Q9Y5H7 936 aa12.66□□□□□ -0.38
PTPN20-229ENST00000513756 FRMD3A2A2Y4 597 aa12.65□□□□□ -0.38
PTPN20-229ENST00000513756 CBX4O00257 560 aa12.65□□□□□ -0.38
PTPN20-229ENST00000513756 MDM4O15151 490 aa12.65□□□□□ -0.38
PTPN20-229ENST00000513756 CYP26A1O43174 497 aa12.65□□□□□ -0.38
PTPN20-229ENST00000513756 PHACTR2O75167 634 aa12.65□□□□□ -0.38
PTPN20-229ENST00000513756 CLSTN1O94985 981 aa12.65□□□□□ -0.38
PTPN20-229ENST00000513756 RALAP11233 206 aa12.65□□□□□ -0.38
PTPN20-229ENST00000513756 TXLNAP40222 546 aa12.65□□□□□ -0.38
PTPN20-229ENST00000513756 ARRB1P49407 418 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-229ENST00000513756 PSEN1P49768 467 aa12.65□□□□□ -0.38
PTPN20-229ENST00000513756 PCBP4P57723 403 aaKnown RBP12.65□□□□□ -0.38
PTPN20-229ENST00000513756 MYL6P60660 151 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms