RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	XPO7	Q9UIA9	1087 aa	Known RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	MYRF	Q9Y2G1	1151 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	PLLP	Q9Y342	182 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	KLF11	O14901	512 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	AVIL	O75366	819 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	PROSC	O94903	275 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	NUDT2	P50583	147 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	MRPS5	P82675	430 aa	Known RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	SLC18A2	Q05940	514 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	PPP2R5D	Q14738	602 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.48	□□□□□ -0.57	3e-7	■■■□□ 15.5
PDCD6-210	ENST00000513582	RGS21	Q2M5E4	152 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	WDR44	Q5JSH3	913 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	GPR107	Q5VW38	600 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	TRIM72	Q6ZMU5	477 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	GPR180	Q86V85	440 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	CBWD2	Q8IUF1	395 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	MCOLN2	Q8IZK6	566 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	PDIK1L	Q8N165	341 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	TMCO5A	Q8N6Q1	288 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	SREK1	Q8WXA9	508 aa	Known RBP	11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	CPT1B	Q92523	772 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	TAMM41	Q96BW9	452 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	PPP1R36	Q96LQ0	422 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	KCNK16	Q96T55	309 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	WDR11	Q9BZH6	1224 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	EHD1	Q9H4M9	534 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	GID8	Q9NWU2	228 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	GIN1	Q9NXP7	522 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	GPRC5D	Q9NZD1	345 aa		11.48	□□□□□ -0.57
PDCD6-210	ENST00000513582	KLHL41	O60662	606 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	MFAP3	P55082	362 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	CAMK2B	Q13554	666 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	KCNJ8	Q15842	424 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	ARHGEF16	Q5VV41	709 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	ZNF720	Q7Z2F6	126 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	NLGN1	Q8N2Q7	840 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	AGR3	Q8TD06	166 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	SEMA4D	Q92854	862 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	CMTM5	Q96DZ9	223 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	FERMT1	Q9BQL6	677 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	RIMS3	Q9UJD0	308 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	PPME1	Q9Y570	386 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	TIMM22	Q9Y584	194 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	CORIN	Q9Y5Q5	1042 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	C1orf232	A0A0U1RR37	186 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	C7orf72	A4D263	438 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	TMEM63A	O94886	807 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	XRCC1	P18887	633 aa	Predicted RBP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	SPIRE1	Q08AE8	756 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	CLEC16A	Q2KHT3	1053 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	C16orf46	Q6P387	395 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	TMEM179	Q6ZVK1	233 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	SETD3	Q86TU7	594 aa	Predicted RBP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	SIX5	Q8N196	739 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	CDRT15	Q96T59	188 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	PNPO	Q9NVS9	261 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	NXF1	Q9UBU9	619 aa	Known RBP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	ITGA11	Q9UKX5	1188 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	ARHGAP26	Q9UNA1	814 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	EIF3D	O15371	548 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	GAP43	P17677	238 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	KCNA4	P22459	653 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	SERPINB5	P36952	375 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	ETFB	P38117	255 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	NSF	P46459	744 aa	Known RBP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	ALDH3B2	P48448	385 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	BMX	P51813	675 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	RPL10A	P62906	217 aa	Known RBP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	CCDC142	Q17RM4	750 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	USP41	Q3LFD5	358 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	CEP55	Q53EZ4	464 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	VASH1	Q7L8A9	365 aa	Predicted RBP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	HAUS6	Q7Z4H7	955 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	PPIL6	Q8IXY8	311 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	NDUFAF2	Q8N183	169 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	ZNF713	Q8N859	430 aa	Predicted RBP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	FAM156A	Q8NDB6	213 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	TBC1D15	Q8TC07	691 aa		11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	DCPS	Q96C86	337 aa	Known RBP	11.47	□□□□□ -0.57
PDCD6-210	ENST00000513582	KRBA1	A5PL33	1030 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	FOS	P01100	380 aa	Predicted RBP	11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	CLK2	P49760	499 aa	Known RBP	11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	LIG4	P49917	911 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	THOP1	P52888	689 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	WASHC5	Q12768	1159 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	LDLRAP1	Q5SW96	308 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	MROH9	Q5TGP6	573 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	SH2D5	Q6ZV89	423 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	LDHD	Q86WU2	507 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	SLC15A4	Q8N697	577 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	CATSPER1	Q8NEC5	780 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	ADCY4	Q8NFM4	1077 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	PIWIL2	Q8TC59	973 aa	Known RBP	11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	CHURC1	Q8WUH1	139 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	SLC44A1	Q8WWI5	657 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	WNK4	Q96J92	1243 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms