RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 KYAT3Q6YP21 454 aaKnown RBP11.56□□□□□ -0.56
TCOF1-211ENST00000513346 DENND5BQ6ZUT9 1274 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 FBXW8Q8N3Y1 598 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 RBM15BQ8NDT2 890 aaKnown RBP11.56□□□□□ -0.56
TCOF1-211ENST00000513346 APPL2Q8NEU8 664 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 TAS1R2Q8TE23 839 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 DIS3LQ8TF46 1054 aaKnown RBP11.56□□□□□ -0.56
TCOF1-211ENST00000513346 ZNF669Q96BR6 464 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-211ENST00000513346 NAT9Q9BTE0 207 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 SPON2Q9BUD6 331 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 PREBQ9HCU5 417 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 GPRC5CQ9NQ84 441 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 SELENONQ9NZV5 590 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 ZNF180Q9UJW8 692 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 SLC39A10Q9ULF5 831 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 NFS1Q9Y697 457 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 AP3B1O00203 1094 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CYP1A2P05177 515 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 FCGR1AP12314 374 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 FASP25445 335 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 FUT2Q10981 343 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 KCNT1Q5JUK3 1230 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 TBCELQ5QJ74 424 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 CYP4A22Q5TCH4 519 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 HEATR4Q86WZ0 1026 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 ASPSCR1Q9BZE9 553 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 NMUR2Q9GZQ4 415 aa11.56□□□□□ -0.56
TCOF1-211ENST00000513346 RRN3P2A6NIE6 340 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 MATN2O00339 956 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 WDR47O94967 919 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 GSNP06396 782 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 MUTP22033 750 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 STILQ15468 1287 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 RFWD3Q6PCD5 774 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 RINLQ6ZS11 566 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 RNF180Q86T96 592 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 FAR2Q96K12 515 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 PLEKHG4BQ96PX9 1271 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 CAMKK2Q96RR4 588 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 KNDC1Q76NI1 1749 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 SDR42E2A6NKP2 422 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 ALOX15BO15296 676 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 MRPL28Q13084 256 aaKnown RBP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 BOLA3Q53S33 107 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 DACT2Q5SW24 774 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TLDC1Q6P9B6 456 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 PQLC1Q8N2U9 271 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 GMCL1P1Q8NEA9 526 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 BHLHE22Q8NFJ8 381 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TMC2Q8TDI7 906 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 VCPIP1Q96JH7 1222 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TRIM62Q9BVG3 475 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 MROH8Q9H579 483 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 ACSS3Q9H6R3 686 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 PIDD1Q9HB75 910 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 GRHL1Q9NZI5 618 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 DRG1Q9Y295 367 aaKnown RBP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 WASF2Q9Y6W5 498 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 ADAMTSL3P82987 1691 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TBX10O75333 385 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 SOX11P35716 441 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 FDFT1P37268 417 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 RSBN1Q5VWQ0 802 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TAF2Q6P1X5 1199 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 SLFN11Q7Z7L1 901 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 ZFYVE19Q96K21 471 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 BTBD9Q96Q07 612 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 MMTAG2Q9BU76 263 aaKnown RBP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 ZDHHC18Q9NUE0 388 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TMEM59LQ9UK28 342 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TBX20Q9UMR3 447 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 NR2E1Q9Y466 385 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 FOXO6A8MYZ6 492 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 EXTL3O43909 919 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TADA2AO75478 443 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 SLURP2P0DP57 97 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TSHRP16473 764 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 CAPRIN1Q14444 709 aaKnown RBP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 VSTM1Q6UX27 236 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 CCDC81Q6ZN84 652 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 SATL1Q86VE3 508 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 TRIM63Q969Q1 353 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 COX4I2Q96KJ9 171 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 GLT1D1Q96MS3 346 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 COQ7Q99807 217 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 NOL6Q9H6R4 1146 aaKnown RBP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 C17orf75Q9HAS0 396 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 PNPLA3Q9NST1 481 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 LNPEPQ9UIQ6 1025 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 ZMYND8Q9ULU4 1186 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-211ENST00000513346 PSMD13Q9UNM6 376 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 RPS6KL1Q9Y6S9 549 aa11.55□□□□□ -0.56
TCOF1-211ENST00000513346 CAPN8A6NHC0 703 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 PRR5-ARHGAP8B1AHC4 643 aa11.54□□□□□ -0.56
TCOF1-211ENST00000513346 TRDMT1O14717 391 aaKnown RBP11.54□□□□□ -0.56
TCOF1-211ENST00000513346 TGDSO95455 350 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms