RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 A0A087WV62 115 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 KELP23276 732 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 SLC8A1P32418 973 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 VPS41P49754 854 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 GHRHRQ02643 423 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 MORC3Q14149 939 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 FAM110CQ1W6H9 321 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 GLE1Q53GS7 698 aaKnown RBP6.16□□□□□ -1.42
CHD1-209ENST00000512844 AWAT1Q58HT5 328 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 FAM90A2PQ658T7 463 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 RINT1Q6NUQ1 792 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 YTHDF3Q7Z739 585 aaKnown RBP6.16□□□□□ -1.42
CHD1-209ENST00000512844 SRRM1Q8IYB3 904 aaKnown RBP6.16□□□□□ -1.42
CHD1-209ENST00000512844 GALNT16Q8N428 558 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 OR52L2PQ8NGH6 319 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
CHD1-209ENST00000512844 AKAP1Q92667 903 aaKnown RBP eCLIP6.16□□□□□ -1.42
CHD1-209ENST00000512844 CRB3Q9BUF7 120 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 WDR12Q9GZL7 423 aaKnown RBP6.16□□□□□ -1.42
CHD1-209ENST00000512844 TMEM8AQ9HCN3 771 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 RXFP3Q9NSD7 469 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 ABHD10Q9NUJ1 306 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 COMMD10Q9Y6G5 202 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 SPATA31A1Q5TZJ5 1347 aa6.16□□□□□ -1.42
CHD1-209ENST00000512844 NPC1O15118 1278 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 CBFA2T3O75081 653 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 NTSR2O95665 410 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 CELA2AP08217 269 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 ARHGAP25P42331 645 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 CHAF1AQ13111 956 aaPredicted RBP6.15□□□□□ -1.42
CHD1-209ENST00000512844 SLC14A1Q13336 389 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 FHL3Q13643 280 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 KPNB1Q14974 876 aaKnown RBP6.15□□□□□ -1.42
CHD1-209ENST00000512844 ELF2Q15723 593 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 CEP78Q5JTW2 689 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 ZNF569Q5MCW4 686 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 ATPAF1Q5TC12 328 aaPredicted RBP6.15□□□□□ -1.42
CHD1-209ENST00000512844 SLC18B1Q6NT16 456 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 ZNF66Q6ZN08 573 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 NEK8Q86SG6 692 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 UEVLDQ8IX04 471 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 ENAHQ8N8S7 591 aaPredicted RBP6.15□□□□□ -1.42
CHD1-209ENST00000512844 PRSS3P2Q8NHM4 247 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 PRR11Q96HE9 360 aaPredicted RBP6.15□□□□□ -1.42
CHD1-209ENST00000512844 SH2D3AQ9BRG2 576 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 PDGFCQ9NRA1 345 aa6.15□□□□□ -1.42
CHD1-209ENST00000512844 WIPF3A6NGB9 483 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 CTIFO43310 598 aaKnown RBP6.14□□□□□ -1.43
CHD1-209ENST00000512844 ASNA1O43681 348 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 ANXA6P08133 673 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 ITGA2BP08514 1039 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 ITGA5P08648 1049 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 CD63P08962 238 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 PRR35P0CG20 571 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 ALADP13716 330 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 POLE2P56282 527 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 SPARCL1Q14515 664 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 PUM3Q15397 648 aaKnown RBP6.14□□□□□ -1.43
CHD1-209ENST00000512844 TRIM71Q2Q1W2 868 aaKnown RBP6.14□□□□□ -1.43
CHD1-209ENST00000512844 ZACNQ401N2 412 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 MTX3Q5HYI7 312 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 ACSM6Q6P461 480 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 PIK3AP1Q6ZUJ8 805 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 SPICE1Q8N0Z3 855 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 FAM71BQ8TC56 605 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 SENP7Q9BQF6 1050 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 SLC29A3Q9BZD2 475 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 OBP2BQ9NPH6 170 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 SLC52A1Q9NWF4 448 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 ASNSD1Q9NWL6 643 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 LRFN1Q9P244 771 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 KLHL13Q9P2N7 655 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 PCDHB7Q9Y5E2 793 aa6.14□□□□□ -1.43
CHD1-209ENST00000512844 SIRT4Q9Y6E7 314 aaPredicted RBP6.14□□□□□ -1.43
CHD1-209ENST00000512844 CCDC187A0A096LP49 1063 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 AQP12BA6NM10 295 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 KCNU1A8MYU2 1149 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 FCHO1O14526 889 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 PCDH17O14917 1159 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 LATS1O95835 1130 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 IL6STP40189 918 aaPredicted RBP6.13□□□□□ -1.43
CHD1-209ENST00000512844 MMP13P45452 471 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 PLCD1P51178 756 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 BLMHQ13867 455 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 ANKRD40Q6AI12 368 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 SRFBP1Q8NEF9 429 aaKnown RBP6.13□□□□□ -1.43
CHD1-209ENST00000512844 PNISRQ8TF01 805 aaKnown RBP6.13□□□□□ -1.43
CHD1-209ENST00000512844 POF1BQ8WVV4 589 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 GLMPQ8WWB7 406 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 REXO5Q96IC2 774 aaKnown RBP6.13□□□□□ -1.43
CHD1-209ENST00000512844 RPS6KC1Q96S38 1066 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 IGSF9Q9P2J2 1179 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 TAGLN3Q9UI15 199 aa6.13□□□□□ -1.43
CHD1-209ENST00000512844 SMIM35A0A1B0GVV1 85 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 LGALS16A8MUM7 142 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 INPPL1O15357 1258 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 TAF5LO75529 589 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 THBS4P35443 961 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 PTK2BQ14289 1009 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 PDCD2Q16342 344 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms