RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 OVGP1Q12889 678 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 GRB14Q14449 540 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 SLC25A52Q3SY17 297 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 HEATR6Q6AI08 1181 aaKnown RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 CDHR3Q6ZTQ4 885 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 BNIPLQ7Z465 357 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 LONP2Q86WA8 852 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 MAB21L3Q8N8X9 362 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 ACMSDQ8TDX5 336 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 TFB1MQ8WVM0 346 aaKnown RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 HTR3CQ8WXA8 447 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 NT5C3BQ969T7 300 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 TTC17Q96AE7 1141 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 C18orf25Q96B23 403 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 NSL1Q96IY1 281 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 TNIP3Q96KP6 325 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 KCTD15Q96SI1 283 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 DPEP3Q9H4B8 488 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 SETD4Q9NVD3 440 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 DTLQ9NZJ0 730 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 PLXNB2O15031 1838 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 A0A0A0MRY4 1105 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 SMIM28A0A1B0GU29 152 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 XPO1O14980 1071 aaKnown RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 RECQL4O94761 1208 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 NEFHP12036 1026 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 ARL4AP40617 200 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 MRPS5P82675 430 aaKnown RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 NAB1Q13506 487 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 SYCP2LQ5T4T6 812 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 FAXCQ5TGI0 409 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 NCBP2-AS2Q69YL0 99 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 DPY19L2Q6NUT2 758 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 ZNF449Q6P9G9 518 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 C7orf31Q8N865 590 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 OR6J1Q8NGC5 347 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 OXNAD1Q96HP4 312 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 MAML3Q96JK9 1138 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 MS4A4AQ96JQ5 239 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 SPATA13Q96N96 652 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 HNRNPABQ99729 332 aaKnown RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 BTBD10Q9BSF8 475 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 TINF2Q9BSI4 451 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 NAT9Q9BTE0 207 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 TMEM120AQ9BXJ8 343 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 MMADHCQ9H3L0 296 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 ALG13Q9NP73 1137 aaKnown RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 FZD10Q9ULW2 581 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 NUMBLQ9Y6R0 609 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 HMX2A2RU54 273 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 SDR42E2A6NKP2 422 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 I3L4J1 428 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 OPHN1O60890 802 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 PEX11AO75192 247 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 F2P00734 622 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 LMNAP02545 664 aaKnown RBP9.54□□□□□ -0.88
CPNE4-210ENST00000512332 CSH1P0DML2 217 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 CSH2P0DML3 217 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 GNAZP19086 355 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 EPHX2P34913 555 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 GLUD2P49448 558 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 TAF6P49848 677 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 NBPF20Q3BBV1 942 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 ANKRD20A2Q5SQ80 823 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 ANKRD20A1Q5TYW2 823 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 ANKRD20A3Q5VUR7 823 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 LRRC8BQ6P9F7 803 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 KYAT3Q6YP21 454 aaKnown RBP9.54□□□□□ -0.88
CPNE4-210ENST00000512332 MARK2Q7KZI7 788 aaKnown RBP9.54□□□□□ -0.88
CPNE4-210ENST00000512332 ANKRD23Q86SG2 305 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 DPP9Q86TI2 863 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 APPL2Q8NEU8 664 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 CLEC4CQ8WTT0 213 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 E2F7Q96AV8 911 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 FERMT1Q9BQL6 677 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 TRIM6Q9C030 488 aaPredicted RBP9.54□□□□□ -0.88
CPNE4-210ENST00000512332 SNX25Q9H3E2 840 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 BATF3Q9NR55 127 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 PPP1R12AO14974 1030 aaPredicted RBP9.54□□□□□ -0.88
CPNE4-210ENST00000512332 SNNO75324 88 aaPredicted RBP9.54□□□□□ -0.88
CPNE4-210ENST00000512332 DAB1O75553 588 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 STK10O94804 968 aaKnown RBP9.54□□□□□ -0.88
CPNE4-210ENST00000512332 CCDC130P13994 396 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 WARSP23381 471 aaKnown RBP9.54□□□□□ -0.88
CPNE4-210ENST00000512332 LMO2P25791 158 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 EPHB2P29323 1055 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 SERPINB3P29508 390 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 GTF2A2P52657 109 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 ADAM17P78536 824 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 OCRLQ01968 901 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 SV2CQ496J9 727 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 TRMT10BQ6PF06 316 aaKnown RBP9.54□□□□□ -0.88
CPNE4-210ENST00000512332 GPR142Q7Z601 462 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 TOP6BLQ8N6T0 577 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 CCDC185Q8N715 623 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 SLC2A14Q8TDB8 520 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 KCTD13Q8WZ19 329 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 SLC9A7Q96T83 725 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 SIKE1Q9BRV8 207 aa9.54□□□□□ -0.88
CPNE4-210ENST00000512332 DUSP16Q9BY84 665 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms