RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SLC38A7Q9NVC3 462 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 THG1LQ9NWX6 298 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 GDAP2Q9NXN4 497 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 DPP3Q9NY33 737 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 GTF3C4Q9UKN8 822 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 GUCA1BQ9UMX6 200 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 YIPF1Q9Y548 306 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 PTPRDP23468 1912 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 ASH1LQ9NR48 2969 aaKnown RBP11.02□□□□□ -0.64
PDLIM5-217ENST00000512274 FLNBO75369 2602 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 PIRO00625 290 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 CYP26A1O43174 497 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 ABL1P00519 1130 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 OR4Q2P0C623 313 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 FTH1P19P0C7X4 201 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 PNMA6AP0CW24 399 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 GALCP54803 685 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 GSCP56915 257 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 CYP4F8P98187 520 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 SOX4Q06945 474 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 MYO1EQ12965 1108 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 WHAMMP3Q1A5X7 153 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 CLEC16AQ2KHT3 1053 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 ANO7Q6IWH7 933 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 GAREM2Q75VX8 874 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 DPH6Q7L8W6 267 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 SLC47A2Q86VL8 602 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 SLC35F6Q8N357 371 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 FRMD1Q8N878 549 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 LRRC57Q8N9N7 239 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 RBBP8NLQ8NC74 664 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 CTNNBL1Q8WYA6 563 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 ZNF560Q96MR9 790 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 PPP1R10Q96QC0 940 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 HPS4Q9NQG7 708 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 CISHQ9NSE2 258 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 UVRAGQ9P2Y5 699 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 RNF14Q9UBS8 474 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 AFF4Q9UHB7 1163 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 LCMT1Q9UIC8 334 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 CDC23Q9UJX2 597 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 PCDHB9Q9Y5E1 797 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 MRFAP1Q9Y605 127 aa11.02□□□□□ -0.65
PDLIM5-217ENST00000512274 SMIM28A0A1B0GU29 152 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 MAP3K13O43283 966 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 SH3BP5O60239 455 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 OPHN1O60890 802 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 CILPO75339 1184 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 ITGB3P05106 788 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 CYP1A2P05177 515 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 ARSAP15289 507 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 GABRR2P28476 465 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 PTGER3P43115 390 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 GUCY2FP51841 1108 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 CYP4F3Q08477 520 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 MRPL58Q14197 206 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 STILQ15468 1287 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 TRIP6Q15654 476 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 ARHGAP15Q53QZ3 475 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 SCARA3Q6AZY7 606 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 SPOPLQ6IQ16 392 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 ACAD10Q6JQN1 1059 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 ZNF572Q7Z3I7 529 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 C11orf74Q86VG3 221 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 UNC93AQ86WB7 457 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 PHF13Q86YI8 300 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 MARCH9Q86YJ5 346 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 SYT12Q8IV01 421 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 SYCE1Q8N0S2 351 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 ADAMTS14Q8WXS8 1223 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 EZH1Q92800 747 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 C18orf25Q96B23 403 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 FAM212AQ96EL1 285 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 HPDLQ96IR7 371 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 UROC1Q96N76 676 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 ZMAT2Q96NC0 199 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 DCBLD2Q96PD2 775 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 ARID3AQ99856 593 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 P2RY13Q9BPV8 354 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 IRX2Q9BZI1 471 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 LHX5Q9H2C1 402 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 CRISPLD1Q9H336 500 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 OBP2AQ9NY56 170 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 TRIM10Q9UDY6 481 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 SALL4Q9UJQ4 1053 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 CAPN6Q9Y6Q1 641 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 CACNA1EQ15878 2313 aa11.01□□□□□ -0.65
PDLIM5-217ENST00000512274 ANTXRLA6NF34 631 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 UPK3BL1B0FP48 263 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 UPK3BL2E5RIL1 263 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 PYCARD-AS1I3L0S3 204 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 PODXLO00592 558 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 SYN3O14994 580 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 SOAT2O75908 522 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 VNN2O95498 520 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 CD59P13987 128 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 TCP1P17987 556 aaKnown RBP11□□□□□ -0.65
PDLIM5-217ENST00000512274 DRD1P21728 446 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 GNA15P30679 374 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms