RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 ATICP31939 592 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ALDH18A1P54886 795 aaKnown RBP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 EIF3EP60228 445 aaKnown RBP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 GALK2Q01415 458 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 OTUD4Q01804 1114 aaKnown RBP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 TRAF2Q12933 501 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 DNASE1L3Q13609 305 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 GNA13Q14344 377 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 MESDQ14696 234 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 COG2Q14746 738 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 GPR107Q5VW38 600 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 KRT80Q6KB66 452 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 NEK5Q6P3R8 708 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 DGLUCYQ7Z3D6 616 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ADAMTSL2Q86TH1 951 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 DGKHQ86XP1 1220 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 TMEM151BQ8IW70 566 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 SAMD14Q8IZD0 417 aaPredicted RBP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 PROM2Q8N271 834 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 C7orf57Q8NEG2 295 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 HERVK_113Q902F9 699 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 RAD54LQ92698 747 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 TXNDC15Q96J42 360 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ZNF347Q96SE7 839 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 TSG101Q99816 390 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ZNF341Q9BYN7 854 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 OR2B2Q9GZK3 357 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 GPR88Q9GZN0 384 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ZHX3Q9H4I2 956 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 NOL6Q9H6R4 1146 aaKnown RBP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 LRRC19Q9H756 370 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 TMEM206Q9H813 350 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 SCPEP1Q9HB40 452 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 PNPLA3Q9NST1 481 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 GIMAP4Q9NUV9 329 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 SLC17A7Q9P2U7 560 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ARHGAP26Q9UNA1 814 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 DNM3Q9UQ16 869 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 UBR1Q8IWV7 1749 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 GAKO14976 1311 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 A0A087WXM4 84 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ARHGEF37A1IGU5 675 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 TRIM77I1YAP6 450 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 TM9SF1O15321 606 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 SPOPO43791 374 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 SH3BP5O60239 455 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ACSL4O60488 711 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 IL1BP01584 269 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 PROCP04070 461 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ERBB2P04626 1255 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 KRT3P12035 628 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 CDH1P12830 882 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 PLS3P13797 630 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 AOC1P19801 751 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ITIH1P19827 911 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 NR2F2P24468 414 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 AMPD3Q01432 767 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 NFATC3Q12968 1075 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 FAM205BPQ63HN1 556 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 CARM1Q86X55 608 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 SLC13A5Q86YT5 568 aaPredicted RBP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 FIBCD1Q8N539 461 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 BEND7Q8N7W2 519 aaPredicted RBP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 GLIS1Q8NBF1 620 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 TBCKQ8TEA7 893 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 GRK7Q8WTQ7 553 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ELMO3Q96BJ8 720 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 DCPSQ96C86 337 aaKnown RBP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ZSWIM1Q9BR11 485 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 ISCA1Q9BUE6 129 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 WWP1Q9H0M0 922 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 EHMT1Q9H9B1 1298 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 POLMQ9NP87 494 aaPredicted RBP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.54□□□□□ -1.2
CPNE4-208ENST00000511604 IL20Q9NYY1 176 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 LRP2BPQ9P2M1 347 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 SLC8A2Q9UPR5 921 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 PCDHB4Q9Y5E5 795 aa7.54□□□□□ -1.2
CPNE4-208ENST00000511604 PCP4L1A6NKN8 68 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 AREL1O15033 823 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ASNA1O43681 348 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CLPXO76031 633 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CALM1P0DP23 149 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CALM2P0DP24 149 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CALM3P0DP25 149 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ATF2P15336 505 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 FGFR2P21802 821 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 TBXAS1P24557 533 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 TTKP33981 857 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 GRM5P41594 1212 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CBX5P45973 191 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CACNB3P54284 484 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 MAP3K7CLP57077 242 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 FCHO2Q0JRZ9 810 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 UBAP2LQ14157 1087 aaKnown RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CCNG2Q16589 344 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 FAM47CQ5HY64 1035 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 FAM26FQ5R3K3 315 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 KIAA1841Q6NSI8 718 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms