RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PLEKHM1Q9Y4G2 1056 aa7.93□□□□□ -1.14
USP53-206ENST00000510737 HEG1Q9ULI3 1381 aa7.93□□□□□ -1.14
USP53-206ENST00000510737 UBE2Q2LH0YL09 131 aa7.92□□□□□ -1.14
USP53-206ENST00000510737 FPR3P25089 353 aa7.92□□□□□ -1.14
USP53-206ENST00000510737 ADORA2AP29274 412 aa7.92□□□□□ -1.14
USP53-206ENST00000510737 HLFQ16534 295 aa7.92□□□□□ -1.14
USP53-206ENST00000510737 CXorf36Q9H7Y0 433 aa7.92□□□□□ -1.14
USP53-206ENST00000510737 XPR1Q9UBH6 696 aa7.92□□□□□ -1.14
USP53-206ENST00000510737 USP16Q9Y5T5 823 aa7.92□□□□□ -1.14
USP53-206ENST00000510737 ASTN2O75129 1339 aaPredicted RBP7.92□□□□□ -1.14
USP53-206ENST00000510737 MRC1P22897 1456 aa7.92□□□□□ -1.14
USP53-206ENST00000510737 SPTBN5Q9NRC6 3674 aaKnown RBP7.91□□□□□ -1.14
USP53-206ENST00000510737 E5RJQ4 531 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 H7C1Q1 480 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 SNUPNO95149 360 aaKnown RBP7.91□□□□□ -1.14
USP53-206ENST00000510737 VNN1O95497 513 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 ALDH2P05091 517 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 CYP2A6P11509 494 aaPredicted RBP7.91□□□□□ -1.14
USP53-206ENST00000510737 VIPR2P41587 438 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 CCT4P50991 539 aaKnown RBP7.91□□□□□ -1.14
USP53-206ENST00000510737 E2F2Q14209 437 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 CYP1B1Q16678 543 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 LY6KQ17RY6 165 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 DEPDC1Q5TB30 811 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 ZNF790Q6PG37 636 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 TTC5Q8N0Z6 440 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 SOCS4Q8WXH5 440 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 DAZAP1Q96EP5 407 aaKnown RBP7.91□□□□□ -1.14
USP53-206ENST00000510737 MVB12AQ96EY5 273 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 ATP6V0A2Q9Y487 856 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 SPEF1Q9Y4P9 236 aa7.91□□□□□ -1.14
USP53-206ENST00000510737 LAMB4A4D0S4 1761 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 ABCC12Q96J65 1359 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 KIF7Q2M1P5 1343 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 KCNQ3O43525 872 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 EXOC3O60645 756 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 UCP3P55916 312 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 GPSM2P81274 684 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 MYO1EQ12965 1108 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 MTHFSDQ2M296 383 aaKnown RBP7.9□□□□□ -1.14
USP53-206ENST00000510737 RNASE12Q5GAN4 147 aaKnown RBP7.9□□□□□ -1.14
USP53-206ENST00000510737 KHDC1LQ5JSQ8 128 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 L1TD1Q5T7N2 865 aaKnown RBP7.9□□□□□ -1.14
USP53-206ENST00000510737 KRT73Q86Y46 540 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 TERB1Q8NA31 727 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 RBM17Q96I25 401 aaKnown RBP7.9□□□□□ -1.14
USP53-206ENST00000510737 ZNF333Q96JL9 665 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 KRTAP2-2Q9BYT5 123 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 AFG3L2Q9Y4W6 797 aa7.9□□□□□ -1.14
USP53-206ENST00000510737 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.9□□□□□ -1.14
USP53-206ENST00000510737 CACNA1IQ9P0X4 2223 aa7.9□□□□□ -1.15
USP53-206ENST00000510737 KIF20BQ96Q89 1820 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 CEP290O15078 2479 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 TCRBV5S1A1TA0A578 114 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 PSMD14O00487 310 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 IL33O95760 270 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 RENBPP51606 427 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 TPTEP56180 551 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 FKBP1BP68106 108 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 ZNF260Q3ZCT1 412 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 ZNF517Q6ZMY9 492 aaPredicted RBP7.89□□□□□ -1.15
USP53-206ENST00000510737 DPY19L3Q6ZPD9 716 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 IL17REQ8NFR9 667 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 ABHD11Q8NFV4 315 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 HSPBAP1Q96EW2 488 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 MRGPRX1Q96LB2 322 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 SNX18Q96RF0 628 aa7.89□□□□□ -1.15
USP53-206ENST00000510737 POC1B-GALNT4F8VUJ3 575 aa7.88□□□□□ -1.15
USP53-206ENST00000510737 FCHO1O14526 889 aa7.88□□□□□ -1.15
USP53-206ENST00000510737 HOXB6P17509 224 aaKnown RBP7.88□□□□□ -1.15
USP53-206ENST00000510737 ATP5F1P24539 256 aaPredicted RBP7.88□□□□□ -1.15
USP53-206ENST00000510737 KCNJ5P48544 419 aa7.88□□□□□ -1.15
USP53-206ENST00000510737 ALDH5A1P51649 535 aaPredicted RBP7.88□□□□□ -1.15
USP53-206ENST00000510737 TRIP6Q15654 476 aaKnown RBP7.88□□□□□ -1.15
USP53-206ENST00000510737 MIS18BP1Q6P0N0 1132 aa7.88□□□□□ -1.15
USP53-206ENST00000510737 GALNT4Q8N4A0 578 aa7.88□□□□□ -1.15
USP53-206ENST00000510737 MESP1Q9BRJ9 268 aa7.88□□□□□ -1.15
USP53-206ENST00000510737 ARMT1Q9H993 441 aa7.88□□□□□ -1.15
USP53-206ENST00000510737 GGA3Q9NZ52 723 aa7.88□□□□□ -1.15
USP53-206ENST00000510737 SCAF8Q9UPN6 1271 aaKnown RBP7.88□□□□□ -1.15
USP53-206ENST00000510737 STXBP5LQ9Y2K9 1186 aa7.88□□□□□ -1.15
USP53-206ENST00000510737 LUC7L2Q9Y383 392 aaKnown RBP7.88□□□□□ -1.15
USP53-206ENST00000510737 SLC11A2P49281 568 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 PDE6CP51160 858 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 LAMB3Q13751 1172 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 SLC4A8Q2Y0W8 1093 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 CCDC157Q569K6 752 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 CRELD2Q6UXH1 353 aaPredicted RBP7.87□□□□□ -1.15
USP53-206ENST00000510737 Q7L0L9 218 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 NRACQ8N912 160 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 CD99L2Q8TCZ2 262 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 HMCESQ96FZ2 354 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 TMEM79Q9BSE2 394 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 ASIC5Q9NY37 505 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 SHOC2Q9UQ13 582 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 SNX14Q9Y5W7 946 aa7.87□□□□□ -1.15
USP53-206ENST00000510737 LINC00205P59089 165 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 SREBF2Q12772 1141 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 LRRC41Q15345 812 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 SUSD4Q5VX71 490 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms