RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 P2RY2P41231 377 aa23.99■■□□□ 1.43
SNF8-209ENST00000510558 TPD52L1Q16890 204 aaPredicted RBP23.99■■□□□ 1.43
SNF8-209ENST00000510558 MSANTD2Q6P1R3 559 aa23.99■■□□□ 1.43
SNF8-209ENST00000510558 PGBD3Q8N328 593 aa23.99■■□□□ 1.43
SNF8-209ENST00000510558 C12orf50Q8NA57 414 aaPredicted RBP23.99■■□□□ 1.43
SNF8-209ENST00000510558 CLEC4CQ8WTT0 213 aa23.99■■□□□ 1.43
SNF8-209ENST00000510558 RLN3Q8WXF3 142 aa23.99■■□□□ 1.43
SNF8-209ENST00000510558 SLC27A6Q9Y2P4 619 aa23.99■■□□□ 1.43
SNF8-209ENST00000510558 MSI1O43347 362 aaKnown RBP23.98■■□□□ 1.43
SNF8-209ENST00000510558 LTFP02788 710 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 SLC9A1P19634 815 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 GPD2P43304 727 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 MTIF2P46199 727 aaKnown RBP23.98■■□□□ 1.43
SNF8-209ENST00000510558 MFAP3P55082 362 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 CREB5Q02930 508 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 AASDHQ4L235 1098 aaPredicted RBP23.98■■□□□ 1.43
SNF8-209ENST00000510558 SDE2Q6IQ49 451 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 GJB7Q6PEY0 223 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 GBP6Q6ZN66 633 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 SPACA7Q96KW9 195 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 FAM81BQ96LP2 452 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 NUP62CLQ9H1M0 184 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 SMOC1Q9H4F8 434 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 VPS45Q9NRW7 570 aa23.98■■□□□ 1.43
SNF8-209ENST00000510558 DNAH14Q0VDD8 3507 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 A0A1W2PQF6 199 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 BCLAF3A2AJT9 711 aaKnown RBP23.97■■□□□ 1.43
SNF8-209ENST00000510558 SLC30A4O14863 429 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 LETM1O95202 739 aaPredicted RBP23.97■■□□□ 1.43
SNF8-209ENST00000510558 GABRG2P18507 467 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 DPCR1Q3MIW9 517 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 DENND1BQ6P3S1 775 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 DDI1Q8WTU0 396 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 GOLGA1Q92805 767 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 GABRG3Q99928 467 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 MIS12Q9H081 205 aa23.97■■□□□ 1.43
SNF8-209ENST00000510558 CEP192Q8TEP8 1941 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 TNRC6BQ9UPQ9 1833 aaKnown RBP23.96■■□□□ 1.43
SNF8-209ENST00000510558 MED19A0JLT2 244 aaPredicted RBP23.96■■□□□ 1.43
SNF8-209ENST00000510558 GTPBP10A4D1E9 387 aaKnown RBP23.96■■□□□ 1.43
SNF8-209ENST00000510558 MED7O43513 233 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 LATS1O95835 1130 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 GNA15P30679 374 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 RPL34P49207 117 aaKnown RBP23.96■■□□□ 1.43
SNF8-209ENST00000510558 APBA1Q02410 837 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 MEA1Q16626 185 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 ARHGAP44Q17R89 818 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 EXOC3L4Q17RC7 722 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 GEN1Q17RS7 908 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 MAP7D1Q3KQU3 841 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 IPO4Q8TEX9 1081 aaKnown RBP23.96■■□□□ 1.43
SNF8-209ENST00000510558 ZNF606Q8WXB4 792 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 THAP9Q9H5L6 903 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 CD248Q9HCU0 757 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 ST7Q9NRC1 585 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 CACNA2D2Q9NY47 1150 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 APEX2Q9UBZ4 518 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 STOML2Q9UJZ1 356 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 CLEC4EQ9ULY5 219 aa23.96■■□□□ 1.43
SNF8-209ENST00000510558 DCDC2BA2VCK2 349 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 BECN2A8MW95 431 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 GFRA2O00451 464 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 THAP12O43422 761 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 CAVIN2O95810 425 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 ACADSBP45954 432 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 BYSLQ13895 437 aaKnown RBP23.95■■□□□ 1.42
SNF8-209ENST00000510558 MPPE1Q53F39 396 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 KIAA1211LQ6NV74 962 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 CLEC17AQ6ZS10 378 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 ANKS1BQ7Z6G8 1248 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 FRMD1Q8N878 549 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 ERLEC1Q96DZ1 483 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 PIWIL1Q96J94 861 aaKnown RBP23.95■■□□□ 1.42
SNF8-209ENST00000510558 SLC2A11Q9BYW1 496 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 ACP6Q9NPH0 428 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 RXFP3Q9NSD7 469 aa23.95■■□□□ 1.42
SNF8-209ENST00000510558 ZBTB24O43167 697 aaPredicted RBP23.94■■□□□ 1.42
SNF8-209ENST00000510558 MAP3K13O43283 966 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 TSPAN3O60637 253 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 IGLV3-27P01718 113 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 PON1P27169 355 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 HOXD9P28356 352 aaPredicted RBP23.94■■□□□ 1.42
SNF8-209ENST00000510558 USP8P40818 1118 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 DHPSP49366 369 aaPredicted RBP23.94■■□□□ 1.42
SNF8-209ENST00000510558 ZNF445P59923 1031 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 MAN2A1Q16706 1144 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 ADGRF1Q5T601 910 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 CYP2U1Q7Z449 544 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 FAM114A1Q8IWE2 563 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 SCUBE3Q8IX30 993 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 STK32AQ8WU08 396 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 CALCOCO1Q9P1Z2 691 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 DACH1Q9UI36 760 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 MBD1Q9UIS9 605 aaPredicted RBP23.94■■□□□ 1.42
SNF8-209ENST00000510558 RAD54BQ9Y620 910 aa23.94■■□□□ 1.42
SNF8-209ENST00000510558 WASH3PC4AMC7 463 aa23.93■■□□□ 1.42
SNF8-209ENST00000510558 SART1O43290 800 aaKnown RBP23.93■■□□□ 1.42
SNF8-209ENST00000510558 FYNP06241 537 aa23.93■■□□□ 1.42
SNF8-209ENST00000510558 NCAM1P13591 858 aa23.93■■□□□ 1.42
SNF8-209ENST00000510558 ERCC5P28715 1186 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms