RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 PDAP1Q13442 181 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 PTK6Q13882 451 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 GRM3Q14832 879 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 LRRC26Q2I0M4 334 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 CCDC157Q569K6 752 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ZC3H12AQ5D1E8 599 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 CHPFQ8IZ52 775 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 TPCN2Q8NHX9 752 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 UHMK1Q8TAS1 419 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 GDAP1L1Q96MZ0 367 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 HNRNPABQ99729 332 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 FRMD8Q9BZ67 464 aaPredicted RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 ZCCHC2Q9C0B9 1178 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 ARHGEF38Q9NXL2 777 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 PKD2L2Q9NZM6 624 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 AKAP7Q9P0M2 348 aaPredicted RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 TPX2Q9ULW0 747 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 NDRG2Q9UN36 371 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 TAF1P21675 1872 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 RGS20O76081 388 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 SERPINF2P08697 491 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 DDX5P17844 614 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 RGS4P49798 205 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 SCNN1BP51168 640 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 MARSP56192 900 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 SESN2P58004 480 aaPredicted RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 KDSRQ06136 332 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 COL9A3Q14050 684 aaPredicted RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 UBXN2BQ14CS0 331 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ACOX1Q15067 660 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 USP45Q70EL2 814 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ZNF571Q7Z3V5 609 aaPredicted RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 SUGP1Q8IWZ8 645 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 EXD1Q8NHP7 514 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 LHX5Q9H2C1 402 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 BCAS3Q9H6U6 928 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 RAB6BQ9NRW1 208 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 DNAJC17Q9NVM6 304 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 XPO7Q9UIA9 1087 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 MYH8P13535 1937 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 IGKV6D-21A0A0A0MT36 114 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 SIGLEC16A6NMB1 481 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 KPNA3O00505 521 aaPredicted RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 ATG13O75143 517 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ADAMTS4O75173 837 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 SYF2O95926 243 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 PYGLP06737 847 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ATXN8OSP0DMR3 200 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ELF2Q15723 593 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ZBTB41Q5SVQ8 909 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 MAP3K21Q5TCX8 1036 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 C11orf63Q6NUN7 778 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 LCLAT1Q6UWP7 414 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 SPOCD1Q6ZMY3 1216 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 KLHDC9Q8NEP7 349 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 KAT2BQ92831 832 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 PTPRN2Q92932 1015 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 TRMT61BQ9BVS5 477 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 NUDT5Q9UKK9 219 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 L1RE1Q9UN81 338 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 A0A087WUV0 522 aaPredicted RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 HACD1B0YJ81 288 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 WDR5P61964 334 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 ARID5BQ14865 1188 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 HIF1AQ16665 826 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 C2CD6Q53TS8 623 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.29□□□□□ -1.56
PHF3-210ENST00000509876 FAM71AQ8IYT1 594 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 GPATCH11Q8N954 259 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 TC2NQ8N9U0 490 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 BLOC1S5Q8TDH9 187 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 R3HDMLQ9H3Y0 253 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 VPS18Q9P253 973 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 SNX24Q9Y343 169 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 FRMD3A2A2Y4 597 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 SMIM24O75264 130 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 PMPCBO75439 489 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 APRTP07741 180 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 RBP3P10745 1247 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 CORO1AP31146 461 aaKnown RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 GATMP50440 423 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ZNF143P52747 638 aaPredicted RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 ERVK-21P61565 698 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 KCNT1Q5JUK3 1230 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 PPP1R15BQ5SWA1 713 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 EPM2AIP1Q7L775 607 aaPredicted RBP5.29□□□□□ -1.56
PHF3-210ENST00000509876 LRRC49Q8IUZ0 686 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 LPCAT1Q8NF37 534 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 AUTS2Q8WXX7 1259 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 BTBD6Q96KE9 485 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 BTN2A3PQ96KV6 586 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 GOLPH3Q9H4A6 298 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ZNF212Q9UDV6 495 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 PHIPQ8WWQ0 1821 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 GALTP07902 379 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 EIF3BP55884 814 aaKnown RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 STX1BP61266 288 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 TTLL9Q3SXZ7 439 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ZBED8Q8IZ13 594 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms