RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 HAPLN3Q96S86 360 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 C17orf80Q9BSJ5 609 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 IL17RBQ9NRM6 502 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 MYO1AQ9UBC5 1043 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 MSH6P52701 1360 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 LMO7Q8WWI1 1683 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 ALS2Q96Q42 1657 aa8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 N4BP2Q86UW6 1770 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC11-206ENST00000509857 RGS12O14924 1447 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 FAM208AQ9UK61 1670 aaKnown RBP8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 RASA4BC9J798 803 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 H0YIZ8 118 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 AREL1O15033 823 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 RASA4O43374 803 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 PRKAR1BP31321 381 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 AARS2Q5JTZ9 985 aaKnown RBP8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 TSTD2Q5T7W7 516 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 CCDC30Q5VVM6 783 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 IL31Q6EBC2 164 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 KRT28Q7Z3Y7 464 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 CAND1Q86VP6 1230 aaKnown RBP8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 LIX1LQ8IVB5 337 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 ZNF668Q96K58 619 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 THUMPD2Q9BTF0 503 aaKnown RBP8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 R3HDMLQ9H3Y0 253 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 DUSP22Q9NRW4 184 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 ARPP21Q9UBL0 812 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 TSPYL4Q9UJ04 414 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 PHTF1Q9UMS5 762 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 ST3GAL5Q9UNP4 418 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 TNNQ9UQP3 1299 aa8.03□□□□□ -1.12
TRAPPC11-206ENST00000509857 RGS10O43665 173 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 PROP1O75360 226 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 NDUFB7P17568 137 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 FGFR2P21802 821 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 PTH2RP49190 550 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 AK2P54819 239 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 ELLP55199 621 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 TPTEP56180 551 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 PLEKHO1Q53GL0 409 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 BMP2KLQ5H9B9 411 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 KLHDC7AQ5VTJ3 777 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 MZT2AQ6P582 158 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 CATSPERGQ6ZRH7 1159 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 Q6ZWC4 215 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 ADGRG3Q86Y34 549 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 TBC1D5Q92609 795 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 VN1R3Q9BXE9 311 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 FSD1LQ9BXM9 530 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 ASB6Q9NWX5 421 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 ADAM21Q9UKJ8 722 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 NPHP3Q7Z494 1330 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 ADAMTS7Q9UKP4 1686 aa8.02□□□□□ -1.13
TRAPPC11-206ENST00000509857 A0A087WZ62 844 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 HMMRO75330 724 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 VNN1O95497 513 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 PRKCBP05771 671 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 MYL3P08590 195 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 CTGFP29279 349 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 CYP2C18P33260 490 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 DCTN1Q14203 1278 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 BECN1Q14457 450 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 CYP1B1Q16678 543 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 LONRF1Q17RB8 773 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 FAM153CQ494X1 144 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 FBXO42Q6P3S6 717 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 MTHFD1LQ6UB35 978 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 PARS2Q7L3T8 475 aaKnown RBP8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 MCM10Q7L590 875 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 ZNF804AQ7Z570 1209 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 CHD1LQ86WJ1 897 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 RASAL3Q86YV0 1011 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 LRRC71Q8N4P6 559 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 CCDC33Q8N5R6 958 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 ANKRD44Q8N8A2 993 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 BOLLQ8N9W6 283 aaKnown RBP8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 SVIPQ8NHG7 77 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 XAGE5Q8WWM1 108 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 ZDHHC12Q96GR4 267 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 ZNF700Q9H0M5 742 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 DCTPP1Q9H773 170 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 TRIM36Q9NQ86 728 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 VPS51Q9UID3 782 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 DRG1Q9Y295 367 aaKnown RBP8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 COX11Q9Y6N1 276 aa8.01□□□□□ -1.13
TRAPPC11-206ENST00000509857 CPDO75976 1380 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 KDM3BQ7LBC6 1761 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 M0R3H8 397 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 ZNF213O14771 459 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 IGLV2-14P01704 120 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 DLDP09622 509 aaKnown RBP8□□□□□ -1.13
TRAPPC11-206ENST00000509857 NEK3P51956 506 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 ITGA8P53708 1063 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 PDE1AP54750 535 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 EEFSECP57772 596 aaKnown RBP8□□□□□ -1.13
TRAPPC11-206ENST00000509857 TIRAPP58753 221 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 AKNAD1Q5T1N1 836 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 BEND5Q7L4P6 421 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 RAB11FIP4Q86YS3 637 aa8□□□□□ -1.13
TRAPPC11-206ENST00000509857 OR2C3Q8N628 320 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms