RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 GPR174Q9BXC1 333 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 NIF3L1Q9GZT8 377 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 GOLPH3LQ9H4A5 285 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 CLIC5Q9NZA1 410 aa16.71■□□□□ 0.27
RAB40C-202ENST00000509637 CABIN1Q9Y6J0 2220 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 PTPRBP23467 1997 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 FAM237AA0A1B0GTK4 181 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 TMEM8BA6NDV4 472 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 HLA-EP13747 358 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 NR2F2P24468 414 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 DPP6P42658 865 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 TPMTP51580 245 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 ATXN3P54252 364 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-202ENST00000509637 TRIP6Q15654 476 aaKnown RBP16.7■□□□□ 0.26
RAB40C-202ENST00000509637 PREPLQ4J6C6 727 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-202ENST00000509637 SDE2Q6IQ49 451 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 NUDT18Q6ZVK8 323 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 TMPRSS6Q8IU80 811 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 FAM217AQ8IXS0 508 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 RGL4Q8IZJ4 473 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 HDDC3Q8N4P3 179 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 PRDM16Q9HAZ2 1276 aa16.7■□□□□ 0.26
RAB40C-202ENST00000509637 SGSHP51688 502 aa16.69■□□□□ 0.26
RAB40C-202ENST00000509637 ATL3Q6DD88 541 aa16.69■□□□□ 0.26
RAB40C-202ENST00000509637 LRSAM1Q6UWE0 723 aa16.69■□□□□ 0.26
RAB40C-202ENST00000509637 CACUL1Q86Y37 369 aa16.69■□□□□ 0.26
RAB40C-202ENST00000509637 FAM186BQ8IYM0 893 aa16.69■□□□□ 0.26
RAB40C-202ENST00000509637 SMYD4Q8IYR2 804 aaPredicted RBP16.69■□□□□ 0.26
RAB40C-202ENST00000509637 ZCCHC9Q8N567 271 aaKnown RBP16.69■□□□□ 0.26
RAB40C-202ENST00000509637 ZNF366Q8N895 744 aa16.69■□□□□ 0.26
RAB40C-202ENST00000509637 HEXIM2Q96MH2 286 aaKnown RBP16.69■□□□□ 0.26
RAB40C-202ENST00000509637 ELOVL2Q9NXB9 296 aa16.69■□□□□ 0.26
RAB40C-202ENST00000509637 TOR4AQ9NXH8 423 aa16.69■□□□□ 0.26
RAB40C-202ENST00000509637 FRMD4BQ9Y2L6 1034 aa16.69■□□□□ 0.26
RAB40C-202ENST00000509637 SLC12A8A0AV02 714 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 METTL12A8MUP2 240 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 CALUO43852 315 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-202ENST00000509637 NDUFS2O75306 463 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 IGLV3-19P01714 112 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 NCAM1P13591 858 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 SCAPQ12770 1279 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 TRIP4Q15650 581 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-202ENST00000509637 DCAF12L1Q5VU92 463 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 ARHGAP17Q68EM7 881 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 PM20D1Q6GTS8 502 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 WFDC5Q8TCV5 224 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 ADAMTS14Q8WXS8 1223 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 ULBP1Q9BZM6 244 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 TMEM8AQ9HCN3 771 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 CISHQ9NSE2 258 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 MARCH2Q9P0N8 246 aa16.68■□□□□ 0.26
RAB40C-202ENST00000509637 FNDC3AQ9Y2H6 1198 aaKnown RBP16.68■□□□□ 0.26
RAB40C-202ENST00000509637 MUC22E2RYF6 1773 aaPredicted RBP16.68■□□□□ 0.26
RAB40C-202ENST00000509637 BAHCC1Q9P281 2608 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 ADAMTS20P59510 1910 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 ATRXP46100 2492 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 TSPAN3O60637 253 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 SYPP08247 313 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 FTH1P19P0C7X4 201 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 RALAP11233 206 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 HOXD9P28356 352 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-202ENST00000509637 HLA-FP30511 346 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 PSEN1P49768 467 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 YWHAGP61981 247 aaKnown RBP eCLIP16.67■□□□□ 0.26
RAB40C-202ENST00000509637 COG7P83436 770 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 ADAM9Q13443 819 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 KCNT1Q5JUK3 1230 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 DBX2Q6ZNG2 339 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 INTS8Q75QN2 995 aaKnown RBP16.67■□□□□ 0.26
RAB40C-202ENST00000509637 NAXDQ8IW45 347 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 CPXM2Q8N436 756 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 UBR7Q8N806 425 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 MYEOVQ96EZ4 313 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 TMEM176AQ96HP8 235 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 ZSWIM1Q9BR11 485 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 UBXN6Q9BZV1 441 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 MTG2Q9H4K7 406 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 SFMBT1Q9UHJ3 866 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 EIF2B4Q9UI10 523 aaKnown RBP16.67■□□□□ 0.26
RAB40C-202ENST00000509637 PCOLCE2Q9UKZ9 415 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 CFAP45Q9UL16 551 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 BTBD3Q9Y2F9 522 aa16.67■□□□□ 0.26
RAB40C-202ENST00000509637 FREM2Q5SZK8 3169 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 A0A1B0GTW7 788 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 KCNK3O14649 394 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 CALCAP01258 141 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 C7P10643 843 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 ACSL1P33121 698 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 PSMC2P35998 433 aaKnown RBP16.66■□□□□ 0.26
RAB40C-202ENST00000509637 TKTL1P51854 596 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 PMS1P54277 932 aaKnown RBP16.66■□□□□ 0.26
RAB40C-202ENST00000509637 PDE4CQ08493 712 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 GOLGA8FQ08AF8 430 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 GOLGA8DPQ0D2H9 430 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 SLC14A1Q13336 389 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 PTPRNQ16849 979 aa16.66■□□□□ 0.26
RAB40C-202ENST00000509637 LAYNQ6UX15 382 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms