RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 THADAQ6YHU6 1953 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 KIAA1549LQ6ZVL6 1849 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 SYNCRIPO60506 623 aaKnown RBP16.1■□□□□ 0.17
TPM3-219ENST00000509409 TSPAN3O60637 253 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 PENKP01210 267 aaPredicted RBP16.1■□□□□ 0.17
TPM3-219ENST00000509409 LCP1P13796 627 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 ENGP17813 658 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 HARS2P49590 506 aaKnown RBP16.1■□□□□ 0.17
TPM3-219ENST00000509409 MFAP3P55082 362 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 ARID5AQ03989 594 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 CETN1Q12798 172 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 ST3GAL2Q16842 350 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 GEN1Q17RS7 908 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 KLHL10Q6JEL2 608 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 SLC23A3Q6PIS1 610 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 RGL4Q8IZJ4 473 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 SIX6OS1Q8N1H7 587 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 EDEM1Q92611 657 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 SLC35C1Q96A29 364 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 PLD4Q96BZ4 506 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 DHTKD1Q96HY7 919 aaPredicted RBP16.1■□□□□ 0.17
TPM3-219ENST00000509409 GTPBP2Q9BX10 602 aaKnown RBP16.1■□□□□ 0.17
TPM3-219ENST00000509409 SLC6A14Q9UN76 642 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 SLC27A6Q9Y2P4 619 aa16.1■□□□□ 0.17
TPM3-219ENST00000509409 MYO18AQ92614 2054 aaKnown RBP16.09■□□□□ 0.17
TPM3-219ENST00000509409 NPC1O15118 1278 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 HOXD12P35452 270 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 FMO5P49326 533 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 GFPT1Q06210 699 aaPredicted RBP16.09■□□□□ 0.17
TPM3-219ENST00000509409 ZNF252P-AS1Q0IIN9 211 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 ADIGQ0VDE8 80 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 E2F5Q15329 346 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 BSPRYQ5W0U4 402 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 TMEM270Q6UE05 265 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 ANKS1BQ7Z6G8 1248 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 RABEPKQ7Z6M1 372 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 HDDC3Q8N4P3 179 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 TRIML1Q8N9V2 468 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 DEFB124Q8NES8 71 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 SPATA20Q8TB22 786 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 P2RY11Q96G91 374 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 MRGPRX1Q96LB2 322 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 CEP63Q96MT8 703 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 NT5C1BQ96P26 610 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 CIPCQ9C0C6 399 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 SLC32A1Q9H598 525 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 FSCN3Q9NQT6 498 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 ELOVL2Q9NXB9 296 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 THAP10Q9P2Z0 257 aaPredicted RBP16.09■□□□□ 0.17
TPM3-219ENST00000509409 SFMBT1Q9UHJ3 866 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 MAN1B1Q9UKM7 699 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 LAMA1P25391 3075 aa16.09■□□□□ 0.17
TPM3-219ENST00000509409 KRT37O76014 449 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 SETSIPP0DME0 302 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 CEACAM1P13688 526 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 CSRP1P21291 193 aaKnown RBP16.08■□□□□ 0.16
TPM3-219ENST00000509409 PPP1R2P41236 205 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 IL12RB1P42701 662 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 RGS7P49802 495 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 FOXC1Q12948 553 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 TRIP4Q15650 581 aaPredicted RBP16.08■□□□□ 0.16
TPM3-219ENST00000509409 FUT11Q495W5 492 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 MPPE1Q53F39 396 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 SYCP2LQ5T4T6 812 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 PPM1KQ8N3J5 372 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 CPXM2Q8N436 756 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 HSPA12BQ96MM6 686 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 SLC2A11Q9BYW1 496 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 PRDM16Q9HAZ2 1276 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 CD248Q9HCU0 757 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 ABCC13Q9NSE7 274 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 CLEC4EQ9ULY5 219 aa16.08■□□□□ 0.16
TPM3-219ENST00000509409 HBS1LQ9Y450 684 aaKnown RBP16.08■□□□□ 0.16
TPM3-219ENST00000509409 ACACBO00763 2458 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 YJEFN3A6XGL0 299 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 E7ENQ6 273 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 O00370 1275 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 PIK3R2O00459 728 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 TIMM44O43615 452 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 SERPINF2P08697 491 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 PAEPP09466 180 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 ACADMP11310 421 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 ZNF132P52740 706 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 SHC2P98077 582 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 LCLAT1Q6UWP7 414 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 SLC41A1Q8IVJ1 513 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 NELFBQ8WX92 580 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 KCTD13Q8WZ19 329 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 TMA16Q96EY4 203 aaKnown RBP16.07■□□□□ 0.16
TPM3-219ENST00000509409 PIWIL1Q96J94 861 aaKnown RBP16.07■□□□□ 0.16
TPM3-219ENST00000509409 CD93Q9NPY3 652 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 CNGB3Q9NQW8 809 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 GON4LQ3T8J9 2241 aa16.07■□□□□ 0.16
TPM3-219ENST00000509409 ABCB7O75027 752 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 EPHX1P07099 455 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 SYPP08247 313 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 CD44P16070 742 aaKnown RBP16.06■□□□□ 0.16
TPM3-219ENST00000509409 CD6P30203 668 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 ZNF234Q14588 700 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 CNGA2Q16280 664 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms