RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 VSTM1Q6UX27 236 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 PCGF5Q86SE9 256 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 ZNF598Q86UK7 904 aaKnown RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 AGGF1Q8N302 714 aaeCLIP15.42■□□□□ 0.066e-8■■■■■ 28.7
PHF3-209ENST00000509330 KCTD13Q8WZ19 329 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 TMEM109Q9BVC6 243 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 FRMD8P1Q9BZ68 369 aaPredicted RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 MAGED2Q9UNF1 606 aaPredicted RBP15.42■□□□□ 0.06
PHF3-209ENST00000509330 TRIM17Q9Y577 477 aa15.42■□□□□ 0.06
PHF3-209ENST00000509330 HHLA1C9JL84 531 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 KBTBD13C9JR72 458 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 GOLGA8RI6L899 631 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 KCNK1O00180 336 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 EEF2KO00418 725 aaKnown RBP15.41■□□□□ 0.06
PHF3-209ENST00000509330 TRAPPC3O43617 180 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 CDH16O75309 829 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 SOAT2O75908 522 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 GRK4P32298 578 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 YWHAHQ04917 246 aaPredicted RBP15.41■□□□□ 0.06
PHF3-209ENST00000509330 STAT4Q14765 748 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 EFHC2Q5JST6 749 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 EMC10Q5UCC4 262 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 HEATR6Q6AI08 1181 aaKnown RBP15.41■□□□□ 0.06
PHF3-209ENST00000509330 MFSD5Q6N075 450 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 TRAF7Q6Q0C0 670 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 SIK2Q9H0K1 926 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 EBAG9O00559 213 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 MSI1O43347 362 aaKnown RBP15.41■□□□□ 0.06
PHF3-209ENST00000509330 PQBP1O60828 265 aaKnown RBP15.41■□□□□ 0.06
PHF3-209ENST00000509330 VIMP08670 466 aaKnown RBP15.41■□□□□ 0.06
PHF3-209ENST00000509330 NKX3-2P78367 333 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 OLIG2Q13516 323 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 CPLX4Q7Z7G2 160 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 DBF4BQ8NFT6 615 aa15.41■□□□□ 0.06
PHF3-209ENST00000509330 ATXN2LQ8WWM7 1075 aaKnown RBP15.41■□□□□ 0.06
PHF3-209ENST00000509330 STMN4Q9H169 189 aaPredicted RBP15.41■□□□□ 0.06
PHF3-209ENST00000509330 A0A1W2PPM1 405 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 C9IYK1 514 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 SRGAP2BP0DMP2 458 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 ZKSCAN8Q15776 578 aaPredicted RBP15.4■□□□□ 0.06
PHF3-209ENST00000509330 SLC24A5Q71RS6 500 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 SCLYQ96I15 445 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 CNOT10Q9H9A5 744 aaKnown RBP15.4■□□□□ 0.06
PHF3-209ENST00000509330 CYLDQ9NQC7 956 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 TBC1D13Q9NVG8 400 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 PAK5Q9P286 719 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 SFMBT1Q9UHJ3 866 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 MAD1L1Q9Y6D9 718 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
PHF3-209ENST00000509330 CRADDP78560 199 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 KCNJ11Q14654 390 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 DDR2Q16832 855 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 SMYD5Q6GMV2 418 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 SPATA2LQ8IUW3 424 aaPredicted RBP15.4■□□□□ 0.06
PHF3-209ENST00000509330 FAM193BQ96PV7 902 aaPredicted RBP15.4■□□□□ 0.06
PHF3-209ENST00000509330 SLC2A13Q96QE2 648 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 ACBD6Q9BR61 282 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 TKTL2Q9H0I9 626 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 C12orf65Q9H3J6 166 aaKnown RBP15.4■□□□□ 0.06
PHF3-209ENST00000509330 USP3Q9Y6I4 520 aa15.4■□□□□ 0.06
PHF3-209ENST00000509330 CABYRO75952 493 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 TSPY1Q01534 308 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 SLC45A4Q5BKX6 768 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 NOMO2Q5JPE7 1267 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 ARHGEF18Q6ZSZ5 1173 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 TAC4Q86UU9 113 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 MPP5Q8N3R9 675 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 TTC9BQ8N6N2 239 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 CELF6Q96J87 481 aaKnown RBP15.39■□□□□ 0.05
PHF3-209ENST00000509330 TTC25Q96NG3 672 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 WDR6Q9NNW5 1121 aaKnown RBP15.39■□□□□ 0.05
PHF3-209ENST00000509330 DMAP1Q9NPF5 467 aaPredicted RBP15.39■□□□□ 0.05
PHF3-209ENST00000509330 CNGB3Q9NQW8 809 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 RGS18Q9NS28 235 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 TDRD15B5MCY1 1934 aaKnown RBP15.39■□□□□ 0.05
PHF3-209ENST00000509330 MOXD2PA6NHM9 499 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 MOCS2O96007 188 aaPredicted RBP15.39■□□□□ 0.05
PHF3-209ENST00000509330 ADRA1BP35368 520 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 CCL23P55773 120 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 MTFR1Q15390 333 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 TNFAIP8L3Q5GJ75 292 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 RFX8Q6ZV50 586 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 LRRC8DQ7L1W4 858 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 BHLHA9Q7RTU4 235 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 CDKL3Q8IVW4 592 aaPredicted RBP15.39■□□□□ 0.05
PHF3-209ENST00000509330 LRRC34Q8IZ02 419 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 THEM5Q8N1Q8 247 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 ATP11CQ8NB49 1132 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 KLC2Q9H0B6 622 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 UNC93B1Q9H1C4 597 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 NBNO60934 754 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 FAM155BO75949 473 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 FAM107AO95990 144 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 ERCC2P18074 760 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 SCNN1AP37088 669 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 SLC5A3P53794 718 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 SPARCL1Q14515 664 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 CROCCP2Q86T23 111 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 RELL1Q8IUW5 271 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 ABI1Q8IZP0 508 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms