RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 FTLP02792 175 aaPredicted RBP2.55□□□□□ -2
XRCC4-204ENST00000509268 EPHB1P54762 984 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 GPC5P78333 572 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 KIF5AQ12840 1032 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 MTA1Q13330 715 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 PPP2R5AQ15172 486 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 SMTNL2Q2TAL5 461 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 PTCHD3Q3KNS1 767 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 ARMC9Q7Z3E5 817 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 C11orf96Q7Z7L8 435 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 UEVLDQ8IX04 471 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 ADGRF4Q8IZF3 695 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 PRR26Q8N8Z3 221 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 CTCFLQ8NI51 663 aaPredicted RBP2.55□□□□□ -2
XRCC4-204ENST00000509268 TMEM174Q8WUU8 243 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 CENPIQ92674 756 aaPredicted RBP2.55□□□□□ -2
XRCC4-204ENST00000509268 TEKT5Q96M29 485 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 WDR83Q9BRX9 315 aaKnown RBP2.55□□□□□ -2
XRCC4-204ENST00000509268 TRIM5Q9C035 493 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 DCLK3Q9C098 648 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 TCF7L2Q9NQB0 619 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 DTX4Q9Y2E6 619 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 MED16Q9Y2X0 877 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 INSL5Q9Y5Q6 135 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 WASHC2CQ9Y4E1 1318 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 CKAP5Q14008 2032 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 KIF3BO15066 747 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 CENPBP07199 599 aaPredicted RBP2.54□□□□□ -2
XRCC4-204ENST00000509268 CPA1P15085 419 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 HOXD3P31249 432 aaPredicted RBP2.54□□□□□ -2
XRCC4-204ENST00000509268 UQCRC1P31930 480 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 TIAL1Q01085 375 aaKnown RBP eCLIP2.54□□□□□ -2
XRCC4-204ENST00000509268 Q0VFX4 171 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 PLA1AQ53H76 456 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 SYCP2LQ5T4T6 812 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 MYPOPQ86VE0 399 aaPredicted RBP2.54□□□□□ -2
XRCC4-204ENST00000509268 FAM71DQ8N9W8 422 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 WDYHV1Q96HA8 205 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 C1QTNF4Q9BXJ3 329 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 ASPSCR1Q9BZE9 553 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 MAF1Q9H063 256 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 PUS7LQ9H0K6 701 aaKnown RBP2.54□□□□□ -2
XRCC4-204ENST00000509268 USP29Q9HBJ7 922 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 ARNT2Q9HBZ2 717 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 SARS2Q9NP81 518 aaKnown RBP2.54□□□□□ -2
XRCC4-204ENST00000509268 NKX1-2Q9UD57 310 aaPredicted RBP2.54□□□□□ -2
XRCC4-204ENST00000509268 COMMD10Q9Y6G5 202 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 PHLDB1Q86UU1 1377 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 DOCK7Q96N67 2140 aa2.54□□□□□ -2
XRCC4-204ENST00000509268 ALG1L2C9J202 215 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 SH3BP5O60239 455 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 DTNBO60941 627 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 KATNA1O75449 491 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 LDHAP00338 332 aaKnown RBP2.53□□□□□ -2
XRCC4-204ENST00000509268 GLUD1P00367 558 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 ADRA1DP25100 572 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 GLUD2P49448 558 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 PCYT1AP49585 367 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 RAB27AP51159 221 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 JAK3P52333 1124 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 KRTAP10-8P60410 259 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 SEC61A1P61619 476 aaKnown RBP2.53□□□□□ -2
XRCC4-204ENST00000509268 NKX6-1P78426 367 aaPredicted RBP2.53□□□□□ -2
XRCC4-204ENST00000509268 DSC1Q08554 894 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 KCNJ12Q14500 433 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 KHDC1LQ5JSQ8 128 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 PMS2CLQ68D20 193 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 SH2D6Q7Z4S9 175 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 TFAP2DQ7Z6R9 452 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 C14orf80Q86SX3 495 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 PNMA8AQ86V59 439 aaPredicted RBP2.53□□□□□ -2
XRCC4-204ENST00000509268 CBARPQ8N350 705 aaPredicted RBP2.53□□□□□ -2
XRCC4-204ENST00000509268 RFLNBQ8N5W9 214 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 NODALQ96S42 347 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 MPHOSPH6Q99547 160 aaKnown RBP2.53□□□□□ -2
XRCC4-204ENST00000509268 RETREG1Q9H6L5 497 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 SIRT3Q9NTG7 399 aaPredicted RBP2.53□□□□□ -2
XRCC4-204ENST00000509268 TERF2IPQ9NYB0 399 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 PNMA2Q9UL42 364 aa2.53□□□□□ -2
XRCC4-204ENST00000509268 CCDC189A1A4V9 331 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 H3BUI4 141 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 CAND2O75155 1236 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 PRSS2P07478 247 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 MCM5P33992 734 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 GLIPR1P48060 266 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 MAP2K6P52564 334 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 TXNL4AP83876 142 aaKnown RBP2.53□□□□□ -2.01
XRCC4-204ENST00000509268 EEF1A2Q05639 463 aaKnown RBP2.53□□□□□ -2.01
XRCC4-204ENST00000509268 DHX8Q14562 1220 aaKnown RBP2.53□□□□□ -2.01
XRCC4-204ENST00000509268 PLS1Q14651 629 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 HSP90AB4PQ58FF6 505 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 C6orf10Q5SRN2 563 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 MEX3BQ6ZN04 569 aaKnown RBP2.53□□□□□ -2.01
XRCC4-204ENST00000509268 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.53□□□□□ -2.01
XRCC4-204ENST00000509268 NME8Q8N427 588 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 SAMD3Q8N6K7 520 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 CNTD1Q8N815 330 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 TTC8Q8TAM2 541 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 INPP5DQ92835 1189 aa2.53□□□□□ -2.01
XRCC4-204ENST00000509268 HTATIP2Q9BUP3 242 aa2.53□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms