RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 VPS13AQ96RL7 3174 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 A0A1W2PQ27 194 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 A0A1W2PQ64 194 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 A0A1W2PQD8 194 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 SLC22A31A6NKX4 558 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 FAM170BA6NMN3 283 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 SLC38A8A6NNN8 435 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 C4BPAP04003 597 aaKnown RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 TRIM49P0CI25 452 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 TRIM49CP0CI26 452 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 ADH5P11766 374 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 PSMC3P17980 439 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 WARSP23381 471 aaKnown RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 BDNFP23560 247 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 PAX3P23760 479 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 TUFMP49411 452 aaKnown RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 SNRPNP63162 240 aaKnown RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 MYL7Q01449 175 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 BIRC3Q13489 604 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 SURF1Q15526 300 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 MDH1BQ5I0G3 518 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 CDCP2Q5VXM1 449 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 NAIF1Q69YI7 327 aaPredicted RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 TXNDC8Q6A555 127 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 TRIM68Q6AZZ1 485 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 FAM171BQ6P995 826 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 TSSK4Q6SA08 328 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 NLRC3Q7RTR2 1065 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 SPATA2LQ8IUW3 424 aaPredicted RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 MFSD6LQ8IWD5 586 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 DCP1BQ8IZD4 617 aaKnown RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 TMEM86AQ8N2M4 240 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 MAB21L3Q8N8X9 362 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 KCT2Q8NC54 265 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 LEMD2Q8NC56 503 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 RNF214Q8ND24 703 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 PARD3BQ8TEW8 1205 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 PCED1BQ96HM7 432 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 FNBP1Q96RU3 617 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 TRMT61BQ9BVS5 477 aaKnown RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 ZNF518BQ9C0D4 1074 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 MMRN2Q9H8L6 949 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 TRPV4Q9HBA0 871 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 KIAA1586Q9HCI6 787 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 RBM12Q9NTZ6 932 aaKnown RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 GTSE1Q9NYZ3 720 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 USP25Q9UHP3 1055 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 AP4E1Q9UPM8 1137 aa8.27□□□□□ -1.09
SH3D19-208ENST00000508492 RIF1Q5UIP0 2472 aaKnown RBP8.27□□□□□ -1.09
SH3D19-208ENST00000508492 SDK1Q7Z5N4 2213 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 OTOL1A6NHN0 477 aaPredicted RBP8.26□□□□□ -1.09
SH3D19-208ENST00000508492 ZNF263O14978 683 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 AKAP3O75969 853 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 NOL4O94818 638 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 RHOBTB3O94955 611 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 CLSTN1O94985 981 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 NME1P15531 152 aaKnown RBP8.26□□□□□ -1.09
SH3D19-208ENST00000508492 CCNE1P24864 410 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 PFKPQ01813 784 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 CYP27A1Q02318 531 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 PRKCQQ04759 706 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 PPP3CAQ08209 521 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 FCHO2Q0JRZ9 810 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 MYO1EQ12965 1108 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 VEPH1Q14D04 833 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 NFE2Q16621 373 aaPredicted RBP8.26□□□□□ -1.09
SH3D19-208ENST00000508492 ZNF699Q32M78 642 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 WDR72Q3MJ13 1102 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 PPM1JQ5JR12 505 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 ANKRD34AQ69YU3 496 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 ITIH5Q86UX2 942 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 CELF2-AS1Q8N7Q2 184 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 OR6B3Q8NGW1 331 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 C2orf15Q8WU43 125 aaKnown RBP8.26□□□□□ -1.09
SH3D19-208ENST00000508492 DNASE1L2Q92874 299 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 USP13Q92995 863 aaPredicted RBP8.26□□□□□ -1.09
SH3D19-208ENST00000508492 CHFRQ96EP1 664 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 CYP2S1Q96SQ9 504 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 PRRX2Q99811 253 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 SCAND2PQ9GZW5 306 aaPredicted RBP8.26□□□□□ -1.09
SH3D19-208ENST00000508492 TNKS2Q9H2K2 1166 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 TASP1Q9H6P5 420 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 C2orf42Q9NWW7 574 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 HSFX1Q9UBD0 423 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 KLHL3Q9UH77 587 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 CDH9Q9ULB4 789 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 ASB3Q9Y575 518 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 PIAS3Q9Y6X2 628 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 OTOGLQ3ZCN5 2332 aa8.26□□□□□ -1.09
SH3D19-208ENST00000508492 NUP205Q92621 2012 aa8.25□□□□□ -1.09
SH3D19-208ENST00000508492 ZFHX2Q9C0A1 2572 aaPredicted RBP8.25□□□□□ -1.09
SH3D19-208ENST00000508492 PTPRZ1P23471 2315 aaPredicted RBP8.25□□□□□ -1.09
SH3D19-208ENST00000508492 A0A1W2PQH9 124 aa8.25□□□□□ -1.09
SH3D19-208ENST00000508492 C2orf78A6NCI8 922 aa8.25□□□□□ -1.09
SH3D19-208ENST00000508492 TRIM49BA6NDI0 452 aa8.25□□□□□ -1.09
SH3D19-208ENST00000508492 PRR23AA6NEV1 266 aa8.25□□□□□ -1.09
SH3D19-208ENST00000508492 ANTXRLA6NF34 631 aa8.25□□□□□ -1.09
SH3D19-208ENST00000508492 F8VP50 259 aa8.25□□□□□ -1.09
SH3D19-208ENST00000508492 PDXKO00764 312 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms