RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SOX11P35716 441 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 NUP62P37198 522 aaPredicted RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 RAP1GAPP47736 663 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 RGS4P49798 205 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 RPL14P50914 215 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 SIK1P57059 783 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 RTP1P59025 263 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 GRAPQ13588 217 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 KIZQ2M2Z5 673 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 WDR72Q3MJ13 1102 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 KBTBD2Q8IY47 623 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 NIM1KQ8IY84 436 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ATG16L2Q8NAA4 619 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 GRAPLQ8TC17 118 aaPredicted RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ACMSDQ8TDX5 336 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 RTKNQ9BST9 563 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 UBXN6Q9BZV1 441 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 DENND2DQ9H6A0 471 aaPredicted RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 CCNB1IP1Q9NPC3 277 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ABCB10Q9NRK6 738 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 KRT84Q9NSB2 600 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 RAPGEFL1Q9UHV5 662 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ASAP1Q9ULH1 1129 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 PRG3Q9Y2Y8 225 aaPredicted RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 TRIM17Q9Y577 477 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 KAT6BQ8WYB5 2073 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 USP31Q70CQ4 1352 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 KBTBD13C9JR72 458 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 H7C0S8 307 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 RBAK-RBAKDNI3L0D1 243 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 IL18RAPO95256 599 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 IFNA14P01570 189 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 PDGFRBP09619 1106 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 HIST1H2AGP0C0S8 130 aaPredicted RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 HIST1H2ADP20671 130 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 RRM1P23921 792 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 PTPN7P35236 360 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SNAP25P60880 206 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 VAC14Q08AM6 782 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 MPP3Q13368 585 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 QPRTQ15274 297 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 TSNQ15631 228 aaKnown RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 OTUD3Q5T2D3 398 aaPredicted RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 LMBRD2Q68DH5 695 aaPredicted RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SCARA3Q6AZY7 606 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 TUBA3EQ6PEY2 450 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 MCOLN2Q8IZK6 566 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 THEM5Q8N1Q8 247 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 PSMA8Q8TAA3 256 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 FAM45AQ8TCE6 357 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 HIST1H2AHQ96KK5 128 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 HIST1H2AJQ99878 128 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 H2AFJQ9BTM1 129 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 TEX13BQ9BXU2 312 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 DGCR6LQ9BY27 220 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SERHL2Q9H4I8 314 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SERHLQ9NQF3 203 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 ARL8BQ9NVJ2 186 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 GPRC5DQ9NZD1 345 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 EHD3Q9NZN3 535 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 POLG2Q9UHN1 485 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 REXO2Q9Y3B8 237 aaKnown RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 TELO2Q9Y4R8 837 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 IGSF9BQ9UPX0 1349 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 CFAP65Q6ZU64 1925 aaKnown RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 E9PCH4 1651 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 RCCD1A6NED2 376 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 PGAM1P18669 254 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SLC26A3P40879 764 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 RBP5P82980 135 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 MTM1Q13496 603 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 GIT2Q14161 759 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF235Q14590 738 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SPANXN3Q5MJ09 141 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF572Q7Z3I7 529 aaPredicted RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 ACTL9Q8TC94 416 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 NSUN6Q8TEA1 469 aaKnown RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SLC20A1Q8WUM9 679 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 NSUN4Q96CB9 384 aaKnown RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 MTG1Q9BT17 334 aaPredicted RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 HDHD2Q9H0R4 259 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 MTMR4Q9NYA4 1195 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 CDH9Q9ULB4 789 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 MINPP1Q9UNW1 487 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SUGT1Q9Y2Z0 365 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 AAR2Q9Y312 384 aaKnown RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 A0A0G2JLW4 131 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 AKAP3O75969 853 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 HSMCR30P0CW71 290 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 ETS1P14921 441 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 ALOX15P16050 662 aaPredicted RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 ADORA2BP29275 332 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 IREB2P48200 963 aaKnown RBP7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 GEMP55040 296 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SPIDRQ14159 915 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 STXBP2Q15833 593 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 DOK7Q18PE1 504 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SWSAP1Q6NVH7 229 aa7.5□□□□□ -1.21
UBE2D3-224ENST00000508474 SZRD1Q7Z422 152 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms