RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ZNF77Q15935 545 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 DNAAF5Q86Y56 855 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 CFAP57Q96MR6 1250 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 PACSIN1Q9BY11 444 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 KCNK12Q9HB15 430 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 GKN1Q9NS71 199 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 SYNJ2BP-COX16A0A087WUM0 186 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 C19orf67A6NJJ6 358 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 BTNL10A8MVZ5 291 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 CHADO15335 359 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 KRT86O43790 486 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 STC2O76061 302 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 ENDOD1O94919 500 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 PRAMEF12O95522 483 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 IGLV3-25P01717 112 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 HMBSP08397 361 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 AIF1P55008 147 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 NAP1L1P55209 391 aaKnown RBP20.88■□□□□ 0.93
USP53-203ENST00000507597 CCZ1BP86790 482 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 CCZ1P86791 482 aaPredicted RBP20.88■□□□□ 0.93
USP53-203ENST00000507597 ATP11AP98196 1134 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 CCDC14Q49A88 953 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 SLC35G2Q8TBE7 412 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 FGF14Q92915 247 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 IRF7Q92985 503 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 BTN2A3PQ96KV6 586 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 TBCBQ99426 244 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 IRX2Q9BZI1 471 aaPredicted RBP20.88■□□□□ 0.93
USP53-203ENST00000507597 SMG9Q9H0W8 520 aaKnown RBP20.88■□□□□ 0.93
USP53-203ENST00000507597 COX16Q9P0S2 106 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 DENND4CQ5VZ89 1909 aa20.88■□□□□ 0.93
USP53-203ENST00000507597 DOCK6Q96HP0 2047 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 ANAPC1Q9H1A4 1944 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 FCARP24071 287 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 CORO1AP31146 461 aaKnown RBP20.87■□□□□ 0.93
USP53-203ENST00000507597 PFKPQ01813 784 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 FCHO2Q0JRZ9 810 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 TDGQ13569 410 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 CDO1Q16878 200 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 ACRBPQ8NEB7 543 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 ADAM32Q8TC27 787 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 FAM172AQ8WUF8 416 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 OSCP1Q8WVF1 389 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 CENPIQ92674 756 aaPredicted RBP20.87■□□□□ 0.93
USP53-203ENST00000507597 EXOC4Q96A65 974 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 ARHGEF26Q96DR7 871 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 SLC39A13Q96H72 371 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 ZFRQ96KR1 1074 aaKnown RBP20.87■□□□□ 0.93
USP53-203ENST00000507597 KXD1Q9BQD3 176 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 BRD9Q9H8M2 597 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 DUS2Q9NX74 493 aaKnown RBP20.87■□□□□ 0.93
USP53-203ENST00000507597 CCL26Q9Y258 94 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 ADGRG1Q9Y653 693 aa20.87■□□□□ 0.93
USP53-203ENST00000507597 TYW5A2RUC4 315 aaKnown RBP20.86■□□□□ 0.93
USP53-203ENST00000507597 PJA2O43164 708 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 MSI1O43347 362 aaKnown RBP20.86■□□□□ 0.93
USP53-203ENST00000507597 MTA2O94776 668 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 GJB6O95452 261 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 NFATC1O95644 943 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 IGLV3-27P01718 113 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 CXCR3P49682 368 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 AMPD2Q01433 879 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 HADHQ16836 314 aaKnown RBP20.86■□□□□ 0.93
USP53-203ENST00000507597 VITQ6UXI7 678 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 GJD3Q8N144 294 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 NIPA2Q8N8Q9 360 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 CSGALNACT1Q8TDX6 532 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 ATP2A3Q93084 1043 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 OBSL1O75147 1896 aa20.86■□□□□ 0.93
USP53-203ENST00000507597 CCP110O43303 1012 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 ZSCAN12O43309 604 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 CYBBP04839 570 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 GDI1P31150 447 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 PCK1P35558 622 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 SLC1A1P43005 524 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 HADHBP55084 474 aaKnown RBP20.85■□□□□ 0.93
USP53-203ENST00000507597 EIF4EBP2Q13542 120 aaPredicted RBP20.85■□□□□ 0.93
USP53-203ENST00000507597 ZC3H12AQ5D1E8 599 aaKnown RBP20.85■□□□□ 0.93
USP53-203ENST00000507597 SCYL2Q6P3W7 929 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 SLC44A3Q8N4M1 653 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 UBE2Q2Q8WVN8 375 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 SORCS3Q9UPU3 1222 aa20.85■□□□□ 0.93
USP53-203ENST00000507597 NUP210Q8TEM1 1887 aaPredicted RBP20.85■□□□□ 0.93
USP53-203ENST00000507597 REV3LO60673 3130 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 KCNU1A8MYU2 1149 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 PRPSAP2O60256 369 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 ACSL4O60488 711 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 MAN1A1P33908 653 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 C15orf59Q2T9L4 293 aaPredicted RBP20.84■□□□□ 0.93
USP53-203ENST00000507597 POTEHQ6S545 545 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 BNIPLQ7Z465 357 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 DENND1CQ8IV53 801 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 CPA6Q8N4T0 437 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 RNF10Q8N5U6 811 aaKnown RBP20.84■□□□□ 0.93
USP53-203ENST00000507597 FCRL2Q96LA5 508 aaPredicted RBP20.84■□□□□ 0.93
USP53-203ENST00000507597 HAPLN3Q96S86 360 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 DESI2Q9BSY9 194 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 TKTL2Q9H0I9 626 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 TRPV5Q9NQA5 729 aa20.84■□□□□ 0.93
USP53-203ENST00000507597 PIGVQ9NUD9 493 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms