RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 DAB1O75553 588 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 GRAP2O75791 330 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 APOEP02649 317 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 TYRP14679 529 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 GBP1P32455 592 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 SLC11A2P49281 568 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 ZNF445P59923 1031 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 ASIC2Q16515 512 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 SYPL2Q5VXT5 272 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 Q6ZS52 159 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 TAC4Q86UU9 113 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 C12orf40Q86WS4 652 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 DEFB106AQ8N104 65 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 NUP58Q9BVL2 599 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 EDEM3Q9BZQ6 932 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 FBRSL1Q9HCM7 1045 aaKnown RBP20.13■□□□□ 0.81
LMNA-221ENST00000506981 DNAJC17Q9NVM6 304 aaKnown RBP20.13■□□□□ 0.81
LMNA-221ENST00000506981 IFNKQ9P0W0 207 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 FBXO4Q9UKT5 387 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 CACNA1HO95180 2353 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 FAM170AA1A519 330 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 LRRC53A6NM62 1247 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 CACNG3O60359 315 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 TRUB2O95900 331 aaKnown RBP20.12■□□□□ 0.81
LMNA-221ENST00000506981 IGLV3-27P01718 113 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 CYP1A1P04798 512 aaPredicted RBP20.12■□□□□ 0.81
LMNA-221ENST00000506981 SCNN1AP37088 669 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 NSFP46459 744 aaKnown RBP20.12■□□□□ 0.81
LMNA-221ENST00000506981 GABRB2P47870 512 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 SLC6A11P48066 632 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 TAF5Q15542 800 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 FAM102AQ5T9C2 384 aaPredicted RBP20.12■□□□□ 0.81
LMNA-221ENST00000506981 GRAMD4Q6IC98 578 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 ZNF397Q8NF99 534 aaPredicted RBP20.12■□□□□ 0.81
LMNA-221ENST00000506981 ADAM32Q8TC27 787 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 BAP1Q92560 729 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 BHMTQ93088 406 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 SLC2A13Q96QE2 648 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 AGPAT1Q99943 283 aa20.12■□□□□ 0.81
LMNA-221ENST00000506981 DDX50Q9BQ39 737 aaKnown RBP20.12■□□□□ 0.81
LMNA-221ENST00000506981 IRAK2O43187 625 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 CBFA2T2O43439 604 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 TULP3O75386 442 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 KAT7O95251 611 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 CHRNB2P17787 502 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 GRIA2P42262 883 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 CXCL12P48061 93 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 CSTF1Q05048 431 aaKnown RBP20.11■□□□□ 0.81
LMNA-221ENST00000506981 FIGNQ5HY92 759 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 ADGRF1Q5T601 910 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 SFMBT2Q5VUG0 894 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 XYLT1Q86Y38 959 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 ETFBKMTQ8IXQ9 262 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 RNF214Q8ND24 703 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 DDI1Q8WTU0 396 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 ACDQ96AP0 544 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 IQCDQ96DY2 449 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 PRMT8Q9NR22 394 aaPredicted RBP20.11■□□□□ 0.81
LMNA-221ENST00000506981 STAP1Q9ULZ2 295 aa20.11■□□□□ 0.81
LMNA-221ENST00000506981 SYNJ2BP-COX16A0A087WUM0 186 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 TYW5A2RUC4 315 aaKnown RBP20.1■□□□□ 0.81
LMNA-221ENST00000506981 TBC1D3BA6NDS4 549 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 GOLGA8SH3BPF8 625 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 NOS2P35228 1153 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 SEC13P55735 322 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 RNASE9P60153 205 aaKnown RBP20.1■□□□□ 0.81
LMNA-221ENST00000506981 NHLH1Q02575 133 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 GAS6Q14393 721 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 MPPE1Q53F39 396 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 MAMSTRQ6ZN01 415 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 MMS22LQ6ZRQ5 1243 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 FAM217AQ8IXS0 508 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 RPLP0P6Q8NHW5 317 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 RNF34Q969K3 372 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 FAM122AQ96E09 287 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 FCRL2Q96LA5 508 aaPredicted RBP20.1■□□□□ 0.81
LMNA-221ENST00000506981 C11orf70Q9BRQ4 267 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 DDIT4Q9NX09 232 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 RRN3Q9NYV6 651 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 PLK2Q9NYY3 685 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.1■□□□□ 0.81
LMNA-221ENST00000506981 COX16Q9P0S2 106 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 SLC12A6Q9UHW9 1150 aa20.1■□□□□ 0.81
LMNA-221ENST00000506981 ACSL4O60488 711 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 MOCS2O96007 188 aaPredicted RBP20.09■□□□□ 0.81
LMNA-221ENST00000506981 SP9P0CG40 484 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 SLC2A3P11169 496 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 TNFAIP3P21580 790 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 MMP8P22894 467 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 MATKP42679 507 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 DGKGP49619 791 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 SATB1Q01826 763 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 CENPCQ03188 943 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 CLEC16AQ2KHT3 1053 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 ZNF528Q3MIS6 628 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 C2CD6Q53TS8 623 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 ZC3H14Q6PJT7 736 aaKnown RBP20.09■□□□□ 0.81
LMNA-221ENST00000506981 ATP6V0D2Q8N8Y2 350 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 TERB1Q8NA31 727 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 AZIN2Q96A70 460 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms