RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 DDX3XO00571 662 aaKnown RBP eCLIP18.93■□□□□ 0.62
NPHP4-210ENST00000506941 ADH1CP00326 375 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 ADH5P11766 374 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 TFE3P19532 575 aaPredicted RBP18.93■□□□□ 0.62
NPHP4-210ENST00000506941 AVPR2P30518 371 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 FLT3P36888 993 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 OPRD1P41143 372 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 TBX4P57082 545 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 RNASE9P60153 205 aaKnown RBP18.93■□□□□ 0.62
NPHP4-210ENST00000506941 RING1Q06587 406 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 NR1H3Q13133 447 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 EIF4EBP2Q13542 120 aaPredicted RBP18.93■□□□□ 0.62
NPHP4-210ENST00000506941 C12orf40Q86WS4 652 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 DNAAF5Q86Y56 855 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 FAM217AQ8IXS0 508 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 OSBPL6Q9BZF3 934 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 FBRSL1Q9HCM7 1045 aaKnown RBP18.93■□□□□ 0.62
NPHP4-210ENST00000506941 METTL5Q9NRN9 209 aaKnown RBP18.93■□□□□ 0.62
NPHP4-210ENST00000506941 ADAM22Q9P0K1 906 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 CALCOCO1Q9P1Z2 691 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 ZNF510Q9Y2H8 683 aa18.93■□□□□ 0.62
NPHP4-210ENST00000506941 MRPS17Q9Y2R5 130 aaKnown RBP18.93■□□□□ 0.62
NPHP4-210ENST00000506941 TRDMT1O14717 391 aaKnown RBP18.92■□□□□ 0.62
NPHP4-210ENST00000506941 GJB6O95452 261 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 NOS2P35228 1153 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 MATKP42679 507 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 HARS2P49590 506 aaKnown RBP18.92■□□□□ 0.62
NPHP4-210ENST00000506941 GSCP56915 257 aaPredicted RBP18.92■□□□□ 0.62
NPHP4-210ENST00000506941 CDK17Q00537 523 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 C1QBPQ07021 282 aaKnown RBP18.92■□□□□ 0.62
NPHP4-210ENST00000506941 MESP2Q0VG99 397 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 TRIM14Q14142 442 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 TDRD12Q587J7 1177 aaKnown RBP18.92■□□□□ 0.62
NPHP4-210ENST00000506941 ACAD10Q6JQN1 1059 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 C1orf228Q6PIY5 440 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 TPGS1Q6ZTW0 290 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 NPY6RQ99463 290 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 DNAJC7Q99615 494 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 FAM204AQ9H8W3 233 aa18.92■□□□□ 0.62
NPHP4-210ENST00000506941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.92■□□□□ 0.62
NPHP4-210ENST00000506941 TCRBV5S1A1TA0A578 114 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 TMCO5BA8MYB1 307 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 HOXC11O43248 304 aaPredicted RBP18.91■□□□□ 0.62
NPHP4-210ENST00000506941 SERPING1P05155 500 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 CALB1P05937 261 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 HNRNPH3P31942 346 aaKnown RBP18.91■□□□□ 0.62
NPHP4-210ENST00000506941 SLC6A11P48066 632 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 GALK1P51570 392 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 ZNF75DP51815 510 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 TBX2Q13207 712 aaPredicted RBP18.91■□□□□ 0.62
NPHP4-210ENST00000506941 ARID5BQ14865 1188 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 ANO4Q32M45 955 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 ZC3H12AQ5D1E8 599 aaKnown RBP18.91■□□□□ 0.62
NPHP4-210ENST00000506941 TMEM196Q5HYL7 178 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 NUGGCQ68CJ6 796 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 FSTL4Q6MZW2 842 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 WDR59Q6PJI9 974 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 TMC6Q7Z403 805 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 ETFBKMTQ8IXQ9 262 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 MCOLN2Q8IZK6 566 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 EMC1Q8N766 993 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 JOSD2Q8TAC2 188 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 EZH1Q92800 747 aaPredicted RBP18.91■□□□□ 0.62
NPHP4-210ENST00000506941 NT5C3BQ969T7 300 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 CLDN23Q96B33 292 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 NELL2Q99435 816 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 P2RY13Q9BPV8 354 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 RBM12Q9NTZ6 932 aaKnown RBP18.91■□□□□ 0.62
NPHP4-210ENST00000506941 DDIT4Q9NX09 232 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 MARK1Q9P0L2 795 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 ARHGAP20Q9P2F6 1191 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 STOML2Q9UJZ1 356 aa18.91■□□□□ 0.62
NPHP4-210ENST00000506941 SYNJ2BP-COX16A0A087WUM0 186 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 GFRA2O00451 464 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 MFAP3LO75121 409 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 LATS1O95835 1130 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 CHRNB1P11230 501 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 AMPD2Q01433 879 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 GAD2Q05329 585 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 CCINQ13939 588 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 FAM133BQ5BKY9 247 aaKnown RBP18.9■□□□□ 0.62
NPHP4-210ENST00000506941 NADSYN1Q6IA69 706 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 ARCQ7LC44 396 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 UNC45BQ8IWX7 931 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 CPXM2Q8N436 756 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 NAT16Q8N8M0 369 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 C3orf20Q8ND61 904 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 CD101Q93033 1021 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 BHMTQ93088 406 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 TBCBQ99426 244 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 BBS2Q9BXC9 721 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 COX16Q9P0S2 106 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 WDR35Q9P2L0 1181 aa18.9■□□□□ 0.62
NPHP4-210ENST00000506941 XPO7Q9UIA9 1087 aaKnown RBP18.9■□□□□ 0.62
NPHP4-210ENST00000506941 BZW2Q9Y6E2 419 aaKnown RBP18.9■□□□□ 0.62
NPHP4-210ENST00000506941 GOLGA6L7A0A1B0GV03 622 aa18.89■□□□□ 0.61
NPHP4-210ENST00000506941 NEDD8-MDP1E9PL57 170 aa18.89■□□□□ 0.61
NPHP4-210ENST00000506941 M0QYT0 321 aa18.89■□□□□ 0.61
NPHP4-210ENST00000506941 EGFP01133 1207 aa18.89■□□□□ 0.61
NPHP4-210ENST00000506941 GZMAP12544 262 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms