RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 FERP16591 822 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 GJA4P35212 333 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 CHKAP35790 457 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 SLC19A1P41440 591 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 MAGEA9P43362 315 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 HARS2P49590 506 aaKnown RBP7.59□□□□□ -1.19
GYPB-206ENST00000506516 YWHAZP63104 245 aaKnown RBP7.59□□□□□ -1.19
GYPB-206ENST00000506516 CDR2Q01850 454 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 ARID5AQ03989 594 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 GAD2Q05329 585 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 GRSF1Q12849 480 aaKnown RBP eCLIP7.59□□□□□ -1.19
GYPB-206ENST00000506516 EML3Q32P44 896 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 PREPLQ4J6C6 727 aaPredicted RBP7.59□□□□□ -1.19
GYPB-206ENST00000506516 DGKKQ5KSL6 1271 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 OR6B2Q6IFH4 312 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 TRIM72Q6ZMU5 477 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 TOGARAM2Q6ZUX3 1019 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 BHLHA9Q7RTU4 235 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 ERICH1Q86X53 443 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 UNC45BQ8IWX7 931 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 C1orf131Q8NDD1 294 aaKnown RBP7.59□□□□□ -1.19
GYPB-206ENST00000506516 ZNF397Q8NF99 534 aaPredicted RBP7.59□□□□□ -1.19
GYPB-206ENST00000506516 PJA1Q8NG27 643 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 CCDC26Q8TAB7 109 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 RIN3Q8TB24 985 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 CLEC4CQ8WTT0 213 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 DDX1Q92499 740 aaKnown RBP7.59□□□□□ -1.19
GYPB-206ENST00000506516 EDEM1Q92611 657 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 PLD4Q96BZ4 506 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 C18orf8Q96DM3 657 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 IQCDQ96DY2 449 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 ANP32EQ9BTT0 268 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 FOXQ1Q9C009 403 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 IRF2BPLQ9H1B7 796 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 NUCKS1Q9H1E3 243 aaKnown RBP7.59□□□□□ -1.19
GYPB-206ENST00000506516 KCNH6Q9H252 994 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 LMAN1LQ9HAT1 526 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 LTB4R2Q9NPC1 389 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 HPS4Q9NQG7 708 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 NDRG2Q9UN36 371 aaKnown RBP7.59□□□□□ -1.19
GYPB-206ENST00000506516 HBS1LQ9Y450 684 aaKnown RBP7.59□□□□□ -1.19
GYPB-206ENST00000506516 DOCK6Q96HP0 2047 aa7.59□□□□□ -1.19
GYPB-206ENST00000506516 OTOL1A6NHN0 477 aaPredicted RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 TRDMT1O14717 391 aaKnown RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 PAPSS1O43252 624 aaPredicted RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 PI15O43692 258 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 ATP9BO43861 1147 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 STC2O76061 302 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 ADH1CP00326 375 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 DCNP07585 359 aaKnown RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 TNFAIP3P21580 790 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 DRD1P21728 446 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 VARSP26640 1264 aaKnown RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 GBP1P32455 592 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 CDH5P33151 784 aaPredicted RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 SOX9P48436 509 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 GALK1P51570 392 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 ZNF445P59923 1031 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 SLC6A3Q01959 620 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 LRRC32Q14392 662 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 PON2Q15165 354 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 DHCR24Q15392 516 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 FIGNQ5HY92 759 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 SFMBT2Q5VUG0 894 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 CWF19L1Q69YN2 538 aaKnown RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 PPP1R2P3Q6NXS1 205 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 MSANTD2Q6P1R3 559 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 RHBDF2Q6PJF5 856 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 BBS7Q8IWZ6 715 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 SYNPOQ8N3V7 929 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 TMEM105Q8N8V8 129 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 RNF214Q8ND24 703 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 FAM174AQ8TBP5 190 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 CPA5Q8WXQ8 436 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 CD101Q93033 1021 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 XPO6Q96QU8 1125 aaKnown RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 CPXM1Q96SM3 734 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 AGPAT1Q99943 283 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 P2RY13Q9BPV8 354 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 SPHK2Q9NRA0 654 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 SEPT11Q9NVA2 429 aaKnown RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 TMEM51Q9NW97 253 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 ASNSD1Q9NWL6 643 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 IFNKQ9P0W0 207 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 WDR35Q9P2L0 1181 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 SFMBT1Q9UHJ3 866 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 SLC12A6Q9UHW9 1150 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 CYTH4Q9UIA0 394 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 NAALADL1Q9UQQ1 740 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 MTF2Q9Y483 593 aaPredicted RBP7.58□□□□□ -1.2
GYPB-206ENST00000506516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.58□□□□□ -1.2
GYPB-206ENST00000506516 PTPRDP23468 1912 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 DOCK8Q8NF50 2099 aa7.58□□□□□ -1.2
GYPB-206ENST00000506516 MYO10Q9HD67 2058 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 SCAMP3O14828 347 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 HSF2BPO75031 334 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 LATS1O95835 1130 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 ERBB2P04626 1255 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 CYBBP04839 570 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms