RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 ASCC3Q8N3C0 2202 aaKnown RBP22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 SRRM3A6NNA2 597 aaPredicted RBP22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 RHOBTB3O94955 611 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 ZNF883P0CG24 379 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 MFAP3P55082 362 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 DNM1Q05193 864 aaKnown RBP22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 ADAM9Q13443 819 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 TMPRSS6Q8IU80 811 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 GUF1Q8N442 669 aaKnown RBP22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 FBXL13Q8NEE6 735 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 TAS1R2Q8TE23 839 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 DNASE2BQ8WZ79 361 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 TMEM176AQ96HP8 235 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 IPO9Q96P70 1041 aaKnown RBP22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 GPR174Q9BXC1 333 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 LRRC4Q9HBW1 653 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 OSER1Q9NX31 292 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 ELOVL2Q9NXB9 296 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 WSB2Q9NYS7 404 aaPredicted RBP22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 USP36Q9P275 1121 aaKnown RBP22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 NUDT5Q9UKK9 219 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 KLK13Q9UKR3 277 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 ADAMTS9Q9P2N4 1935 aa22.04■■□□□ 1.12
SQSTM1-210ENST00000506042 A0A1B0GVL5 298 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 MDM4O15151 490 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 BCAT2O15382 392 aaPredicted RBP22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 HMBSP08397 361 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 CD59P13987 128 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 MATKP42679 507 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 MXI1P50539 228 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 YWHAGP61981 247 aaKnown RBP eCLIP22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 PDE4CQ08493 712 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 GRIK2Q13002 908 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 ZNF394Q53GI3 561 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 PPP1R26Q5T8A7 1209 aaPredicted RBP22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 DENND1CQ8IV53 801 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 WFIKKN2Q8TEU8 576 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 SETD7Q8WTS6 366 aaKnown RBP22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 ELMO3Q96BJ8 720 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 CDC6Q99741 560 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 TMEM121BQ9BXQ6 578 aaPredicted RBP22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 FSCN3Q9NQT6 498 aa22.03■■□□□ 1.12
SQSTM1-210ENST00000506042 SLC12A8A0AV02 714 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 FAM221BA6H8Z2 402 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 CETN3O15182 167 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 EPHX1P07099 455 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 TRIM49P0CI25 452 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 TRIM49CP0CI26 452 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 EDRF1Q3B7T1 1238 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 INAVAQ3KP66 663 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 FYB2Q5VWT5 728 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 RAB44Q7Z6P3 723 aaPredicted RBP22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 CCDC117Q8IWD4 279 aaPredicted RBP22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 CHCHD4Q8N4Q1 142 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 ADAMTS14Q8WXS8 1223 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 TWNKQ96RR1 684 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 TSG101Q99816 390 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 GTPBP4Q9BZE4 634 aaKnown RBP22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 CD248Q9HCU0 757 aa22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 HBS1LQ9Y450 684 aaKnown RBP22.02■■□□□ 1.12
SQSTM1-210ENST00000506042 PCDH15Q96QU1 1955 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 LAMA1P25391 3075 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 TYW5A2RUC4 315 aaKnown RBP22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 SH3BP5O60239 455 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 LATS1O95835 1130 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 TOP3BO95985 862 aaKnown RBP22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 ZBED1O96006 694 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 PGFP49763 221 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 TPMTP51580 245 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 BCAT1P54687 386 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 ZNF234Q14588 700 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 TTC31Q49AM3 519 aaPredicted RBP22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 DCAF12L1Q5VU92 463 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 SIX6OS1Q8N1H7 587 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 ZCCHC9Q8N567 271 aaKnown RBP22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 ANKRD52Q8NB46 1076 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 GOLGA1Q92805 767 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 ERLEC1Q96DZ1 483 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 IRX2Q9BZI1 471 aaPredicted RBP22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 CISHQ9NSE2 258 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 RMND1Q9NWS8 449 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 RAB20Q9NX57 234 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 AGO1Q9UL18 857 aaKnown RBP22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 HCN2Q9UL51 889 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 LHX6Q9UPM6 363 aa22.01■■□□□ 1.11
SQSTM1-210ENST00000506042 WASH3PC4AMC7 463 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 FLRT2O43155 660 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 ATP5BP06576 529 aaKnown RBP22■■□□□ 1.11
SQSTM1-210ENST00000506042 FTH1P19P0C7X4 201 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 IL12RB1P42701 662 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 AFF3P51826 1226 aaKnown RBP22■■□□□ 1.11
SQSTM1-210ENST00000506042 TKTL1P51854 596 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 ZBTB16Q05516 673 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 ENPP2Q13822 863 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 FNDC3BQ53EP0 1204 aaKnown RBP22■■□□□ 1.11
SQSTM1-210ENST00000506042 ARHGAP17Q68EM7 881 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 SCD5Q86SK9 330 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 PIGZQ86VD9 579 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 SNX19Q92543 992 aa22■■□□□ 1.11
SQSTM1-210ENST00000506042 SKA1Q96BD8 255 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms