RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TSPAN16Q9UKR8 245 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 RAI2Q9Y5P3 530 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 TNRC6BQ9UPQ9 1833 aaKnown RBP13.79□□□□□ -0.2
DDX41-204ENST00000504807 A0A1W2PQF6 199 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 O00370 1275 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 TYRP14679 529 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 ENGP17813 658 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 TNFRSF4P43489 277 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 FMO5P49326 533 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 TKTL1P51854 596 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 STX17P56962 302 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 LRRC63Q05C16 580 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 EFEMP1Q12805 493 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 SEMA3BQ13214 749 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 BECN1Q14457 450 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 MAP7D1Q3KQU3 841 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 KLHL10Q6JEL2 608 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 KLHDC10Q6PID8 442 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 ANKRD52Q8NB46 1076 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 BBS2Q9BXC9 721 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 NUSAP1Q9BXS6 441 aaKnown RBP13.79□□□□□ -0.2
DDX41-204ENST00000504807 ULBP1Q9BZM6 244 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 DNAJC17Q9NVM6 304 aaKnown RBP13.79□□□□□ -0.2
DDX41-204ENST00000504807 ARMCX3Q9UH62 379 aaPredicted RBP13.79□□□□□ -0.2
DDX41-204ENST00000504807 RASAL2Q9UJF2 1139 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 DNMT3LQ9UJW3 386 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 CTNND2Q9UQB3 1225 aa13.79□□□□□ -0.2
DDX41-204ENST00000504807 PCNX2A6NKB5 2137 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 TCRBV21S2A2A0A5A6 115 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 TBC1D3BA6NDS4 549 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 GOLGA6L4A6NEF3 574 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 WASH3PC4AMC7 463 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 PIK3R2O00459 728 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 SMC2O95347 1197 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 GABRG2P18507 467 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 P2RY2P41231 377 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 YWHAGP61981 247 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX41-204ENST00000504807 FYB2Q5VWT5 728 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 PM20D1Q6GTS8 502 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 CCNI2Q6ZMN8 369 aaPredicted RBP13.78□□□□□ -0.2
DDX41-204ENST00000504807 HDDC3Q8N4P3 179 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 ZNF513Q8N8E2 541 aaPredicted RBP13.78□□□□□ -0.2
DDX41-204ENST00000504807 PNPLA1Q8N8W4 532 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 CLEC4CQ8WTT0 213 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 HMGB4Q8WW32 186 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 NELFBQ8WX92 580 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 EXOC4Q96A65 974 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 FAXDC2Q96IV6 333 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 TSG101Q99816 390 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 FSCN3Q9NQT6 498 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 CLIC5Q9NZA1 410 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 DEC1Q9P2X7 70 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 EVLQ9UI08 416 aaPredicted RBP13.78□□□□□ -0.2
DDX41-204ENST00000504807 FBXO10Q9UK96 956 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 AGO1Q9UL18 857 aaKnown RBP13.78□□□□□ -0.2
DDX41-204ENST00000504807 RAD54BQ9Y620 910 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 ABCA7Q8IZY2 2146 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 SPTA1P02549 2419 aa13.78□□□□□ -0.2
DDX41-204ENST00000504807 YJEFN3A6XGL0 299 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 E7ENQ6 273 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 STX10O60499 249 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 PENKP01210 267 aaPredicted RBP13.77□□□□□ -0.21
DDX41-204ENST00000504807 CORO1AP31146 461 aaKnown RBP13.77□□□□□ -0.21
DDX41-204ENST00000504807 PTGER3P43115 390 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 PLA2G4AP47712 749 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 APBA1Q02410 837 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 GEN1Q17RS7 908 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 USP39Q53GS9 565 aaKnown RBP13.77□□□□□ -0.21
DDX41-204ENST00000504807 GRAMD4Q6IC98 578 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 ARMCX6Q7L4S7 300 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 RRAGAQ7L523 313 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 ELOA2Q8IYF1 753 aaPredicted RBP13.77□□□□□ -0.21
DDX41-204ENST00000504807 ZNF276Q8N554 614 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 RBBP8NLQ8NC74 664 aaPredicted RBP13.77□□□□□ -0.21
DDX41-204ENST00000504807 CCDC150Q8NCX0 1101 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 EDEM1Q92611 657 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 DHTKD1Q96HY7 919 aaPredicted RBP13.77□□□□□ -0.21
DDX41-204ENST00000504807 KREMEN1Q96MU8 473 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 GTPBP2Q9BX10 602 aaKnown RBP13.77□□□□□ -0.21
DDX41-204ENST00000504807 UBXN6Q9BZV1 441 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 TMEM74BQ9NUR3 256 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 DACH1Q9UI36 760 aa13.77□□□□□ -0.21
DDX41-204ENST00000504807 ATXN2Q99700 1313 aaKnown RBP13.76□□□□□ -0.21
DDX41-204ENST00000504807 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 UPK3BL1B0FP48 263 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.76□□□□□ -0.21
DDX41-204ENST00000504807 UPK3BL2E5RIL1 263 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 PSMA7O14818 248 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 XPO1O14980 1071 aaKnown RBP13.76□□□□□ -0.21
DDX41-204ENST00000504807 MSI1O43347 362 aaKnown RBP13.76□□□□□ -0.21
DDX41-204ENST00000504807 ZBED1O96006 694 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 CD19P15391 556 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 BRD2P25440 801 aaKnown RBP13.76□□□□□ -0.21
DDX41-204ENST00000504807 RGS7P49802 495 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 SGSHP51688 502 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 ATXN3P54252 364 aaPredicted RBP13.76□□□□□ -0.21
DDX41-204ENST00000504807 ADIGQ0VDE8 80 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 SGO2Q562F6 1265 aa13.76□□□□□ -0.21
DDX41-204ENST00000504807 BTBD8Q5XKL5 378 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms