RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PFKPQ01813 784 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 RING1Q06587 406 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 EIF4EBP2Q13542 120 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 PDGFRLQ15198 375 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 CCDC122Q5T0U0 273 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 SPC24Q8NBT2 197 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 DNASE1L2Q92874 299 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 NT5C3BQ969T7 300 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 WBP2Q969T9 261 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 PLD4Q96BZ4 506 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 OTUB2Q96DC9 234 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 CCDC42Q96M95 316 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 SERPINB11Q96P15 392 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 NPY6RQ99463 290 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 SELENOOQ9BVL4 669 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 DEF6Q9H4E7 631 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 METTL5Q9NRN9 209 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 DUS2Q9NX74 493 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 LSM7Q9UK45 103 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 TLR6Q9Y2C9 796 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 ZNF510Q9Y2H8 683 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 CHD5Q8TDI0 1954 aa12.41□□□□□ -0.42
PDLIM5-208ENST00000504489 C2CD4BA6NLJ0 364 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 GOLGA6L6A8MZA4 724 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 IRAK2O43187 625 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 KLKB1P03952 638 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 KRT3P12035 628 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 ALADP13716 330 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 GBP1P32455 592 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 FLT3P36888 993 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 IFNAR2P48551 515 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 MLLT6P55198 1093 aaPredicted RBP12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 TBX4P57082 545 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 EML3Q32P44 896 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 SLC25A52Q3SY17 297 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 PLEKHA7Q6IQ23 1121 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 TRNP1Q6NT89 227 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 DNAJC24Q6P3W2 148 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 Q6ZNB5 142 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 PHLDB2Q86SQ0 1253 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 TAC4Q86UU9 113 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 TMTC1Q8IUR5 882 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 UNC45BQ8IWX7 931 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 CCDC170Q8IYT3 715 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 TTC16Q8NEE8 873 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 EDAQ92838 391 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 AZIN2Q96A70 460 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 PGAP3Q96FM1 320 aaPredicted RBP12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 ASIC4Q96FT7 647 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 SLC39A13Q96H72 371 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 ZFYVE19Q96K21 471 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 LINC00597Q9H2U6 94 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 PARVAQ9NVD7 372 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 WNT16Q9UBV4 365 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 STAP1Q9ULZ2 295 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 WNT6Q9Y6F9 365 aa12.4□□□□□ -0.42
PDLIM5-208ENST00000504489 ANKRD62A6NC57 917 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 PI4K2BG5E9Z4 385 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 TNFRSF10AO00220 468 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 MSI1O43347 362 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 ENDOD1O94919 500 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 LATS1O95835 1130 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 F9P00740 461 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 HMBSP08397 361 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 PDGFRAP16234 1089 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 CORO1AP31146 461 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 RFC1P35251 1148 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 PTPN9P43378 593 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 HARS2P49590 506 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 GALCP54803 685 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 GSDMDP57764 484 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 PITX1P78337 314 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 RUNX3Q13761 415 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 NUGGCQ68CJ6 796 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 BNIPLQ7Z465 357 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 DNAAF5Q86Y56 855 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 ADGRG2Q8IZP9 1017 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 EMC1Q8N766 993 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 JOSD2Q8TAC2 188 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 ADAM32Q8TC27 787 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 CSGALNACT1Q8TDX6 532 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 RXFP2Q8WXD0 754 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 ATP2A3Q93084 1043 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 FCRL2Q96LA5 508 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 FAM204AQ9H8W3 233 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 HPS4Q9NQG7 708 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 CNOT8Q9UFF9 292 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 MUC3AQ02505 3323 aa12.39□□□□□ -0.43
PDLIM5-208ENST00000504489 M0QYT0 321 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 LCA5LO95447 670 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 GJB6O95452 261 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 NFATC1O95644 943 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 SLC2A3P11169 496 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 GLULP15104 373 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 ARSAP15289 507 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 GPD1P21695 349 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms