RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ALYREFQ86V81 257 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 TTC8Q8TAM2 541 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 CTNNBL1Q8WYA6 563 aaPredicted RBP13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 ASIC4Q96FT7 647 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 FCRL2Q96LA5 508 aaPredicted RBP13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 TRIM62Q9BVG3 475 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 OSGEPQ9NPF4 335 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 TMPRSS4Q9NRS4 437 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 CTTNBP2NLQ9P2B4 639 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 SH3BP1Q9Y3L3 701 aa13.82□□□□□ -0.2
PDLIM7-212ENST00000504380 GOLGA6L7A0A1B0GV03 622 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 TMEM191CA6NGB0 347 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 IRAK2O43187 625 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 CCP110O43303 1012 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 GREM1O60565 184 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 MOCS2O96007 188 aaPredicted RBP13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 ARSAP15289 507 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 CORO1AP31146 461 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 GDI1P31150 447 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 SDC4P31431 198 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 COG7P83436 770 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 DEUP1Q05D60 604 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 SLC25A52Q3SY17 297 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 DAB2IPQ5VWQ8 1189 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 CPNE8Q86YQ8 564 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 DENND1CQ8IV53 801 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 MFSD6LQ8IWD5 586 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 BBS7Q8IWZ6 715 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 YAF2Q8IY57 180 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 GJD3Q8N144 294 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 RNF34Q969K3 372 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 NT5C3BQ969T7 300 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 SERPINB11Q96P15 392 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 KCNF1Q9H3M0 494 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 KIF9Q9HAQ2 790 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 PIGVQ9NUD9 493 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 XPO7Q9UIA9 1087 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 STAP1Q9ULZ2 295 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 HBS1LQ9Y450 684 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 SCINQ9Y6U3 715 aa13.81□□□□□ -0.2
PDLIM7-212ENST00000504380 TMEM110-MUSTN1A8MSY1 372 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 TRDMT1O14717 391 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 IGLV3-27P01718 113 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 PSMC3P17980 439 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 PSMA2P25787 234 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 GBP1P32455 592 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 ZNF143P52747 638 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 VCPP55072 806 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 TNK2Q07912 1038 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 CCDC173Q0VFZ6 552 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 EIF4EBP2Q13542 120 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 ARCQ7LC44 396 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 CCDC112Q8NEF3 446 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 SLC35G2Q8TBE7 412 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 ZNF564Q8TBZ8 553 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 FAM172AQ8WUF8 416 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 SLC39A13Q96H72 371 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 PPP1R9BQ96SB3 815 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 TRMT61BQ9BVS5 477 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 MAGEB5Q9BZ81 275 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 MRPL47Q9HD33 250 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 ANLNQ9NQW6 1124 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 DUS2Q9NX74 493 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 OBP2AQ9NY56 170 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 IGSF9Q9P2J2 1179 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 TRIM10Q9UDY6 481 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 ANAPC7Q9UJX3 599 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 AGO1Q9UL18 857 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 TLR6Q9Y2C9 796 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 SNX10Q9Y5X0 201 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 DUSP10Q9Y6W6 482 aa13.8□□□□□ -0.2
PDLIM7-212ENST00000504380 E2F8A0AVK6 867 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 PI4K2BG5E9Z4 385 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 TCF3P15923 654 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 RDXP35241 583 aaKnown RBP13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 GGCXP38435 758 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 PTPN9P43378 593 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 IFNAR2P48551 515 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 TDGQ13569 410 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 IER5LQ5T953 404 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 CC2D1AQ6P1N0 951 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 SCYL2Q6P3W7 929 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 Q6ZNB5 142 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 HTR3DQ70Z44 454 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 BNIPLQ7Z465 357 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 KIAA1328Q86T90 577 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 FAM131BQ86XD5 332 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 DDX42Q86XP3 938 aaKnown RBP eCLIP13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 ARFGAP1Q8N6T3 406 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 E2F7Q96AV8 911 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 PLD4Q96BZ4 506 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 LACRTQ9GZZ8 138 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 EBF3Q9H4W6 596 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 RRN3Q9NYV6 651 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 MUTYHQ9UIF7 546 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 SALL4Q9UJQ4 1053 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 LSM7Q9UK45 103 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms