RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	C2CD2L	O14523	706 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	MYL3	P08590	195 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	KRT16	P08779	473 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	SNRPA	P09012	282 aa	Known RBP	13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	NPR3	P17342	541 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	ALDH3A1	P30838	453 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	ARL4A	P40617	200 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	GRIA1	P42261	906 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	SULT1E1	P49888	294 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	PITX1	P78337	314 aa	Predicted RBP	13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	MRPS5	P82675	430 aa	Known RBP	13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	CCL14	Q16627	93 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	SPDYA	Q5MJ70	313 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	HEATR6	Q6AI08	1181 aa	Known RBP	13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	CTAGE3P	Q8IX95	158 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	CCDC33	Q8N5R6	958 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	C2orf69	Q8N8R5	385 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	HTR3C	Q8WXA8	447 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	NPY6R	Q99463	290 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	ARHGEF4	Q9NR80	690 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	KANSL3	Q9P2N6	904 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203		Q9Y3F1	56 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	TSC2	P49815	1807 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	FAM159B	A6NKW6	160 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	CLDN5	O00501	218 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	KRT37	O76014	449 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	IGHA2	P01877	340 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	PTPN1	P18031	435 aa	Known RBP	13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	IGFBP6	P24592	240 aa	Predicted RBP	13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	CDHR3	Q6ZTQ4	885 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	MPP5	Q8N3R9	675 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	GSDMB	Q8TAX9	411 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	TFB1M	Q8WVM0	346 aa	Known RBP	13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	FAM149B1	Q96BN6	582 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	ZFP42	Q96MM3	310 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	FAM111A	Q96PZ2	611 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	TRIM56	Q9BRZ2	755 aa	Known RBP	13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	XAB2	Q9HCS7	855 aa	Known RBP	13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	TXLNG	Q9NUQ3	528 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	NR2E3	Q9Y5X4	410 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203		A0A0A0MRY4	1105 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	CYB561D2	O14569	222 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	RFPL1	O75677	317 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	ATP5H	O75947	161 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	CELF2	O95319	508 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	CSH1	P0DML2	217 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	CSH2	P0DML3	217 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	ACAT1	P24752	427 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	NOS2	P35228	1153 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	CCNF	P41002	786 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	NDUFV1	P49821	464 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	PRKD1	Q15139	912 aa	Predicted RBP	13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	DCAF6	Q58WW2	860 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	ANKRD20A2	Q5SQ80	823 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	ANKRD20A1	Q5TYW2	823 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	ANKRD20A3	Q5VUR7	823 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	KIAA0319	Q5VV43	1072 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	FYB2	Q5VWT5	728 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	WSCD1	Q658N2	575 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	TRMT10B	Q6PF06	316 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	CLEC20A	Q6ZU45	233 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	CYS1	Q717R9	158 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	BZW1	Q7L1Q6	419 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	APBB2	Q92870	758 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	SPATA13	Q96N96	652 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	SLC2A13	Q96QE2	648 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	KATNAL1	Q9BW62	490 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	NPHS2	Q9NP85	383 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	MKS1	Q9NXB0	559 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	BAIAP2L1	Q9UHR4	511 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	MFSD11	O43934	449 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	UGT1A9	O60656	530 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	IL1B	P01584	269 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	T-ENOL	P0DO92	83 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	TROVE2	P10155	538 aa	Known RBP eCLIP	13.47	□□□□□ -0.25	9e-6	■□□□□ 8.9
MATR3-233	ENST00000504203	SLC8A3	P57103	927 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	WLS	Q5T9L3	541 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	TWF2	Q6IBS0	349 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	NLRP9	Q7RTR0	991 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	HACE1	Q8IYU2	909 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	RNF139	Q8WU17	664 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	SRPK1	Q96SB4	655 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	LGMN	Q99538	433 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	AP5M1	Q9H0R1	490 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	LRMDA	Q9H2I8	198 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	UGT1A7	Q9HAW7	530 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	UGT1A10	Q9HAW8	530 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	UGT1A8	Q9HAW9	530 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	ALG13	Q9NP73	1137 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	TMPRSS4	Q9NRS4	437 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	MOCS1	Q9NZB8	636 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	PCDHA11	Q9Y5I1	949 aa		13.47	□□□□□ -0.25
MATR3-233	ENST00000504203	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.47	□□□□□ -0.25	2e-6	■■■□□ 14.6
MATR3-233	ENST00000504203	MYO18A	Q92614	2054 aa	Known RBP	13.46	□□□□□ -0.25
MATR3-233	ENST00000504203	HMX2	A2RU54	273 aa		13.46	□□□□□ -0.25
MATR3-233	ENST00000504203	COPE	O14579	308 aa		13.46	□□□□□ -0.25
MATR3-233	ENST00000504203	KLF11	O14901	512 aa		13.46	□□□□□ -0.25
MATR3-233	ENST00000504203	TGDS	O95455	350 aa		13.46	□□□□□ -0.25
MATR3-233	ENST00000504203	MLN	P12872	115 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms