RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 NANPQ8TBE9 248 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 HINFPQ9BQA5 517 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 SCAND2PQ9GZW5 306 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-204ENST00000504131 C12orf65Q9H3J6 166 aaKnown RBP6.42□□□□□ -1.38
CLCN3-204ENST00000504131 C12orf10Q9HB07 376 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 ENTPD7Q9NQZ7 604 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 AP4S1Q9Y587 144 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 TEX51A0A1B0GUA7 166 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 GNG14A0A1W2PPG7 69 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 SPDYE2BA6NHP3 402 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 OR6C70A6NIJ9 312 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 E9PBE3 544 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 ZBTB5O15062 677 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 SPDYE6P0CI01 402 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 RFC4P35249 363 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 ERVK-25P63136 954 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 CAMSAP2Q08AD1 1489 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 COL9A2Q14055 689 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-204ENST00000504131 SEC23AQ15436 765 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 SPDYE2Q495Y8 402 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 SLC10A5Q5PT55 438 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 PDE12Q6L8Q7 609 aaKnown RBP6.42□□□□□ -1.38
CLCN3-204ENST00000504131 PET117Q6UWS5 81 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 DNAAF5Q86Y56 855 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 BBS5Q8N3I7 341 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 WDSUB1Q8N9V3 476 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 OR6J1Q8NGC5 347 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 OR52K1Q8NGK4 314 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 CCDC120Q96HB5 630 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 PHF20Q9BVI0 1012 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 TMEM120AQ9BXJ8 343 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 ERVK-6Q9BXR3 956 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 FRMD8P1Q9BZ68 369 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-204ENST00000504131 PHAXQ9H814 394 aaKnown RBP6.42□□□□□ -1.38
CLCN3-204ENST00000504131 EPB41L5Q9HCM4 733 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 SNTG2Q9NY99 539 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 ERVK-18Q9QC07 812 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 CD300AQ9UGN4 299 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 LIMA1Q9UHB6 759 aaKnown RBP6.42□□□□□ -1.38
CLCN3-204ENST00000504131 DCTN4Q9UJW0 460 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 USP20Q9Y2K6 914 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 DYRK1BQ9Y463 629 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 PCDHGB1Q9Y5G3 927 aa6.42□□□□□ -1.38
CLCN3-204ENST00000504131 HMX3A6NHT5 357 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 ACOD1A6NK06 481 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PPEF1O14829 653 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PMM2O15305 246 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 POLBP06746 335 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 GUCY1A2P33402 732 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PRKCIP41743 596 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 POLR2GP62487 172 aaKnown RBP eCLIP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 RELQ04864 619 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CALCRLQ16602 461 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 LIN52Q52LA3 116 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 NOMO2Q5JPE7 1267 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CLEC2AQ6UVW9 174 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 NIM1KQ8IY84 436 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 SRBD1Q8N5C6 995 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 ASCC1Q8N9N2 400 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 TBC1D15Q8TC07 691 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CCDC51Q96ER9 411 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PRKD2Q9BZL6 878 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CATSPERZQ9NTU4 200 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 NOVA2Q9UNW9 492 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CSADQ9Y600 493 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PDZK1P1A8MUH7 402 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 RIMBP2O15034 1052 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PSMD3O43242 534 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 MYO1DO94832 1006 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 ACSL3O95573 720 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 SBK2P0C263 348 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 DARSP14868 501 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PDE1AP54750 535 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 RELAQ04206 551 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 STOX1Q6ZVD7 989 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 FASTKD5Q7L8L6 764 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PROM2Q8N271 834 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 ZSWIM2Q8NEG5 633 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 LPCAT1Q8NF37 534 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 OR4D6Q8NGJ1 314 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 RMND5BQ96G75 393 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PLEKHA8Q96JA3 519 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 SERPINB12Q96P63 405 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 USB1Q9BQ65 265 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PIMREGQ9BSJ6 248 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 DCUN1D5Q9BTE7 237 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 C9orf16Q9BUW7 83 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 KCNF1Q9H3M0 494 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 TOR3AQ9H497 397 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CCDC134Q9H6E4 229 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 HMG20AQ9NP66 347 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PAQR5Q9NXK6 330 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CACNA2D2Q9NY47 1150 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 PPP2R2CQ9Y2T4 447 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 TIMM22Q9Y584 194 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 TRAPPC8Q9Y2L5 1435 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CCDC78A2IDD5 438 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 AKAP8O43823 692 aaKnown RBP6.41□□□□□ -1.38
CLCN3-204ENST00000504131 EXOC3O60645 756 aa6.41□□□□□ -1.38
CLCN3-204ENST00000504131 CNOT4O95628 575 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms