RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 C12orf40Q86WS4 652 aa18.99■□□□□ 0.63
PDLIM7-209ENST00000503346 C1orf210Q8IVY1 113 aa18.99■□□□□ 0.63
PDLIM7-209ENST00000503346 UNC45BQ8IWX7 931 aa18.99■□□□□ 0.63
PDLIM7-209ENST00000503346 AZIN2Q96A70 460 aa18.99■□□□□ 0.63
PDLIM7-209ENST00000503346 SLC39A13Q96H72 371 aa18.99■□□□□ 0.63
PDLIM7-209ENST00000503346 FCRL2Q96LA5 508 aaPredicted RBP18.99■□□□□ 0.63
PDLIM7-209ENST00000503346 SYT11Q9BT88 431 aa18.99■□□□□ 0.63
PDLIM7-209ENST00000503346 XPO4Q9C0E2 1151 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-209ENST00000503346 IRAK2O43187 625 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 GRAP2O75791 330 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 TRUB2O95900 331 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 SLC6A11P48066 632 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 PTPN5P54829 565 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 CDK17Q00537 523 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 CENPCQ03188 943 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 MTAPQ13126 283 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 ASIC2Q16515 512 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 SFMBT2Q5VUG0 894 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 TPGS1Q6ZTW0 290 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 ADAM32Q8TC27 787 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 EZH1Q92800 747 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 PNKPQ96T60 521 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 BBS2Q9BXC9 721 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 SPATA6Q9NWH7 488 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 ITIH6Q6UXX5 1313 aa18.98■□□□□ 0.63
PDLIM7-209ENST00000503346 A0A0A0MRY4 1105 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 NEDD8-MDP1E9PL57 170 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 GFRA2O00451 464 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 CBFA2T2O43439 604 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 CACNG3O60359 315 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 TULP3O75386 442 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 PENKP01210 267 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 TYRP14679 529 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 NOS2P35228 1153 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 PRKCIP41743 596 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 NSFP46459 744 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 PITX1P78337 314 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 ANGPT1Q15389 498 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 C2CD6Q53TS8 623 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 ADGRF1Q5T601 910 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 FAM102AQ5T9C2 384 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 FYB2Q5VWT5 728 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 E4F1Q66K89 784 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 MMS22LQ6ZRQ5 1243 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 Q6ZS52 159 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 PHF13Q86YI8 300 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 PHTF2Q8N3S3 785 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 SPEM1Q8N4L4 309 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 SLC30A5Q8TAD4 765 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 OLIG1Q8TAK6 271 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 P2RY11Q96G91 374 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 XPO6Q96QU8 1125 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 IRF2BPLQ9H1B7 796 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 NUCKS1Q9H1E3 243 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 RRN3Q9NYV6 651 aa18.97■□□□□ 0.63
PDLIM7-209ENST00000503346 FAM170AA1A519 330 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 KAT7O95251 611 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 GRIA2P42262 883 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 MATKP42679 507 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 SLC11A2P49281 568 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 GSCP56915 257 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 PTP4A2Q12974 167 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 PREPLQ4J6C6 727 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 ARCQ7LC44 396 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 MAML2Q8IZL2 1156 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 NAT16Q8N8M0 369 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 CCDC26Q8TAB7 109 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 SYN2Q92777 582 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 C11orf70Q9BRQ4 267 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 IRX2Q9BZI1 471 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 PRMT8Q9NR22 394 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 ARHGEF4Q9NR80 690 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 SEPT11Q9NVA2 429 aaKnown RBP18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 DEC1Q9P2X7 70 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 TMEM59LQ9UK28 342 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 CAPN11Q9UMQ6 739 aa18.96■□□□□ 0.63
PDLIM7-209ENST00000503346 CHURC1-FNTBB4DL54 471 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 K7EQS6 105 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 LAMTOR5O43504 91 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 ACSL4O60488 711 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 RNF40O75150 1001 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 CYBBP04839 570 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 APODP05090 189 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 TNFAIP3P21580 790 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 GBP1P32455 592 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 ZBED6P86452 979 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 MESP2Q0VG99 397 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 NT5C3BQ969T7 300 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 NPY6RQ99463 290 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 HAUS4Q9H6D7 363 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 FAM204AQ9H8W3 233 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 DNAJC17Q9NVM6 304 aaKnown RBP18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 DDIT4Q9NX09 232 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 ADAM22Q9P0K1 906 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 FBXO10Q9UK96 956 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 FBXO4Q9UKT5 387 aa18.95■□□□□ 0.62
PDLIM7-209ENST00000503346 MIA3Q5JRA6 1907 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 GOLGA8SH3BPF8 625 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 APOEP02649 317 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms