RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 CNGA4Q8IV77 575 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 ADAM32Q8TC27 787 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 PBXIP1Q96AQ6 731 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 ADAM33Q9BZ11 813 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 COL4A3Q01955 1670 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 RTN2O75298 545 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 LATS1O95835 1130 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 HARS2P49590 506 aaKnown RBP26.15■■□□□ 1.78
LSM6-202ENST00000502781 RNASE9P60153 205 aaKnown RBP26.15■■□□□ 1.78
LSM6-202ENST00000502781 LY6G5CQ5SRR4 150 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 NUGGCQ68CJ6 796 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 TXNDC11Q6PKC3 985 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 ZNF852Q6ZMS4 543 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 VPS36Q86VN1 386 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 ZNF687Q8N1G0 1237 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 AZIN2Q96A70 460 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 PGAP3Q96FM1 320 aaPredicted RBP26.15■■□□□ 1.78
LSM6-202ENST00000502781 ISCUQ9H1K1 167 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 SPHK2Q9NRA0 654 aa26.15■■□□□ 1.78
LSM6-202ENST00000502781 METTL5Q9NRN9 209 aaKnown RBP26.15■■□□□ 1.78
LSM6-202ENST00000502781 AKR1B15C9JRZ8 316 aaPredicted RBP26.14■■□□□ 1.78
LSM6-202ENST00000502781 CD72P21854 359 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 ASTE1Q2TB18 679 aaPredicted RBP26.14■■□□□ 1.78
LSM6-202ENST00000502781 BNIPLQ7Z465 357 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 PHLDB2Q86SQ0 1253 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 UNC45BQ8IWX7 931 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 CPXM2Q8N436 756 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 FBXL6Q8N531 539 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 TC2NQ8N9U0 490 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 MFSD1Q9H3U5 465 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 LTB4R2Q9NPC1 389 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 MARK1Q9P0L2 795 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 STAP1Q9ULZ2 295 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 NENFQ9UMX5 172 aa26.14■■□□□ 1.78
LSM6-202ENST00000502781 A0A087X0T9 212 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 SSU72P8A0A1W2PR75 194 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 TMCO5BA8MYB1 307 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 GFRA2O00451 464 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 ADH1CP00326 375 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 FTLP02792 175 aaPredicted RBP26.13■■□□□ 1.77
LSM6-202ENST00000502781 FAM228BP0C875 321 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 RRM1P23921 792 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 CHKAP35790 457 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 AMPD2Q01433 879 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 MAPK8IP2Q13387 824 aaPredicted RBP26.13■■□□□ 1.77
LSM6-202ENST00000502781 SLC25A52Q3SY17 297 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 PPP1R15BQ5SWA1 713 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 TMEM25Q86YD3 366 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 FAM3CQ92520 227 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 NELL2Q99435 816 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 OSBPL6Q9BZF3 934 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 CALCOCO1Q9P1Z2 691 aa26.13■■□□□ 1.77
LSM6-202ENST00000502781 C2CD4BA6NLJ0 364 aa26.12■■□□□ 1.77
LSM6-202ENST00000502781 SIGLEC16A6NMB1 481 aa26.12■■□□□ 1.77
LSM6-202ENST00000502781 HOXC11O43248 304 aaPredicted RBP26.12■■□□□ 1.77
LSM6-202ENST00000502781 KRT3P12035 628 aa26.12■■□□□ 1.77
LSM6-202ENST00000502781 GBP1P32455 592 aa26.12■■□□□ 1.77
LSM6-202ENST00000502781 CLCN5P51795 746 aa26.12■■□□□ 1.77
LSM6-202ENST00000502781 TSR1Q2NL82 804 aaKnown RBP26.12■■□□□ 1.77
LSM6-202ENST00000502781 EMC1Q8N766 993 aa26.12■■□□□ 1.77
LSM6-202ENST00000502781 JOSD2Q8TAC2 188 aa26.12■■□□□ 1.77
LSM6-202ENST00000502781 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.12■■□□□ 1.77
LSM6-202ENST00000502781 FAM204AQ9H8W3 233 aa26.12■■□□□ 1.77
LSM6-202ENST00000502781 ZNHIT6Q9NWK9 470 aaKnown RBP26.12■■□□□ 1.77
LSM6-202ENST00000502781 DDIT4Q9NX09 232 aa26.12■■□□□ 1.77
LSM6-202ENST00000502781 MRPS17Q9Y2R5 130 aaKnown RBP26.12■■□□□ 1.77
LSM6-202ENST00000502781 M0QYT0 321 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 TRDMT1O14717 391 aaKnown RBP26.11■■□□□ 1.77
LSM6-202ENST00000502781 ADH5P11766 374 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 TFE3P19532 575 aaPredicted RBP26.11■■□□□ 1.77
LSM6-202ENST00000502781 AOC1P19801 751 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 EIF4A3P38919 411 aaKnown RBP26.11■■□□□ 1.77
LSM6-202ENST00000502781 GAD2Q05329 585 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 ZC3H12AQ5D1E8 599 aaKnown RBP26.11■■□□□ 1.77
LSM6-202ENST00000502781 PLEKHA7Q6IQ23 1121 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 DNAAF5Q86Y56 855 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 FLCNQ8NFG4 579 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 P2RY11Q96G91 374 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 LRFN3Q9BTN0 628 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 FOXQ1Q9C009 403 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 TMEM51Q9NW97 253 aa26.11■■□□□ 1.77
LSM6-202ENST00000502781 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.11■■□□□ 1.77
LSM6-202ENST00000502781 MTF2Q9Y483 593 aaPredicted RBP26.11■■□□□ 1.77
LSM6-202ENST00000502781 KCNU1A8MYU2 1149 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 ENDOD1O94919 500 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 GJB6O95452 261 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 TARSP26639 723 aaKnown RBP26.1■■□□□ 1.77
LSM6-202ENST00000502781 CDC25BP30305 580 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 RFC1P35251 1148 aaPredicted RBP26.1■■□□□ 1.77
LSM6-202ENST00000502781 OPRD1P41143 372 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 FZD5Q13467 585 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 PPP2R5DQ14738 602 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 ADGRF1Q5T601 910 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 ASTLQ6HA08 431 aaPredicted RBP26.1■■□□□ 1.77
LSM6-202ENST00000502781 DNAJC24Q6P3W2 148 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 ETFBKMTQ8IXQ9 262 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 PJA1Q8NG27 643 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 TBCBQ99426 244 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 SELENOOQ9BVL4 669 aa26.1■■□□□ 1.77
LSM6-202ENST00000502781 ACSL4O60488 711 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms