RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 CASKIN2Q8WXE0 1202 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 TCEAL4Q96EI5 215 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 ANKRD27Q96NW4 1050 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 ZNF317Q96PQ6 595 aaPredicted RBP4.73□□□□□ -1.65
MATR3-202ENST00000502422 ADPGKQ9BRR6 497 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 TRIM4Q9C037 500 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 PHACTR1Q9C0D0 580 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 GRIP2Q9C0E4 1043 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 LRRC4CQ9HCJ2 640 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 PLCB1Q9NQ66 1216 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 DDX25Q9UHL0 483 aaKnown RBP4.73□□□□□ -1.65
MATR3-202ENST00000502422 PLAAQ9Y263 795 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 NUB1Q9Y5A7 615 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 NBEAQ8NFP9 2946 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 DMXL2Q8TDJ6 3036 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 CCDC163A0A0D9SF12 145 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 TTC26A0AVF1 554 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ESYT3A0FGR9 886 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ARHGEF37A1IGU5 675 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 WDR27A2RRH5 827 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 SPECC1L-ADORA2AF8WAN1 911 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 CHADO15335 359 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 SPINT1O43278 529 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 RHOBTB1O94844 696 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 TDP2O95551 362 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 PENKP01210 267 aaPredicted RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 IDEP14735 1019 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 GJA1P17302 382 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 FGFR3P22607 806 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ECHS1P30084 290 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 HOXA6P31267 233 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 GBP1P32455 592 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 CCT6AP40227 531 aaKnown RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 CTSOP43234 321 aaPredicted RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 MATR3P43243 847 aaKnown RBP eCLIP4.72□□□□□ -1.65
MATR3-202ENST00000502422 SOX9P48436 509 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 GUCY2FP51841 1108 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ROR1Q01973 937 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 MBTD1Q05BQ5 628 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 POU5F1BQ06416 359 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ZNF844Q08AG5 666 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 SFSWAPQ12872 951 aaKnown RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 PON2Q15165 354 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 TAF11Q15544 211 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 MEA1Q16626 185 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 IFI16Q16666 785 aaKnown RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 UAP1L1Q3KQV9 507 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 GALNTL6Q49A17 601 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 CCDC38Q502W7 563 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 PRSS36Q5K4E3 855 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ERMARDQ5T6L9 678 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ACBD5Q5T8D3 534 aaPredicted RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 RNF220Q5VTB9 566 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 TCEAL6Q6IPX3 200 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 CCDC70Q6NSX1 233 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 LRIG3Q6UXM1 1119 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 C4orf19Q8IY42 314 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 SYCP3Q8IZU3 236 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 LINC00528Q8N1L1 170 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ARFGAP2Q8N6H7 521 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 LEMD2Q8NC56 503 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 MAIP1Q8WWC4 291 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 KIFAP3Q92845 792 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 TCEAL3Q969E4 200 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 AZIN2Q96A70 460 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 DTNBP1Q96EV8 351 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ZSWIM3Q96MP5 696 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 AIFM3Q96NN9 605 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 NAP1L4Q99733 375 aaKnown RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 LXNQ9BS40 222 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 SLC32A1Q9H598 525 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 PREBQ9HCU5 417 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ASAH2Q9NR71 780 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 SNTG2Q9NY99 539 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 VPS54Q9P1Q0 977 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 NKX1-2Q9UD57 310 aaPredicted RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 BACE2Q9Y5Z0 518 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 CAPN6Q9Y6Q1 641 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ZMYM2Q9UBW7 1377 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 VWA8A3KMH1 1905 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 LOC400499M0QZD8 3231 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 CEP295Q9C0D2 2601 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 MYBPHLA2RUH7 354 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 FAM187AA6NFU0 413 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 LRRIQ4A6NIV6 560 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 EML1O00423 815 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 KHNYNO15037 678 aaKnown RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 B4GALT5O43286 388 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 ICMTO60725 284 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 AKAP3O75969 853 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 TOP3BO95985 862 aaKnown RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 AVPP01185 164 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 PRKCBP05771 671 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 KRT16P08779 473 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 RPL13P26373 211 aaKnown RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 TKTP29401 623 aaKnown RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 NOS2P35228 1153 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 STAT6P42226 847 aa4.72□□□□□ -1.65
MATR3-202ENST00000502422 RNF144AP50876 292 aaPredicted RBP4.72□□□□□ -1.65
MATR3-202ENST00000502422 CLCNKBP51801 687 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms