RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	OLA1	Q9NTK5	396 aa	Known RBP	12.64	□□□□□ -0.39
MATR3-231	ENST00000502394	DDIT4	Q9NX09	232 aa		12.64	□□□□□ -0.39
MATR3-231	ENST00000502394	MTMR10	Q9NXD2	777 aa		12.64	□□□□□ -0.39
MATR3-231	ENST00000502394	ZDHHC7	Q9NXF8	308 aa		12.64	□□□□□ -0.39
MATR3-231	ENST00000502394	FZD10	Q9ULW2	581 aa		12.64	□□□□□ -0.39
MATR3-231	ENST00000502394	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.64	□□□□□ -0.39
MATR3-231	ENST00000502394	TMEM265	A0A087WTH1	108 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ZNF487	B1APH4	448 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	NRG2	O14511	850 aa	Predicted RBP	12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	CEP104	O60308	925 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	TLR5	O60602	858 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	RFPL2	O75678	378 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ZRANB2	O95218	330 aa	Known RBP eCLIP	12.63	□□□□□ -0.39	4e-7	■■■□□ 14.6
MATR3-231	ENST00000502394	OLFM2	O95897	454 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	IGLV3-27	P01718	113 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	KRT1	P04264	644 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	KDELR1	P24390	212 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ADRA1B	P35368	520 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	GJC1	P36383	396 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	SSR1	P43307	286 aa	Known RBP	12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	AIF1	P55008	147 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	PRSS12	P56730	875 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	COPS2	P61201	443 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	SEMA3B	Q13214	749 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	PPP2R5E	Q16537	467 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	DPYSL2	Q16555	572 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	CA9	Q16790	459 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	SMTNL2	Q2TAL5	461 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	KCNT1	Q5JUK3	1230 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	PPM1L	Q5SGD2	360 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ARTN	Q5T4W7	220 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ERMARD	Q5T6L9	678 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	MFSD7	Q6UXD7	560 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	GAREM2	Q75VX8	874 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	RCOR2	Q8IZ40	523 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ZDHHC14	Q8IZN3	488 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	TTC13	Q8NBP0	860 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	RNF139	Q8WU17	664 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	TSC1	Q92574	1164 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ZNF707	Q96C28	371 aa	Predicted RBP	12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ACSF2	Q96CM8	615 aa	Predicted RBP	12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	FAF2	Q96CS3	445 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	RBM41	Q96IZ5	413 aa	Known RBP	12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	SERPINB11	Q96P15	392 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	CCSER2	Q9H7U1	834 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	FAM204A	Q9H8W3	233 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	KLHL11	Q9NVR0	708 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	GPATCH2L	Q9NWQ4	482 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ARHGEF38	Q9NXL2	777 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	SMARCAL1	Q9NZC9	954 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	TRPM5	Q9NZQ8	1165 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	SFMBT1	Q9UHJ3	866 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	NUDT5	Q9UKK9	219 aa		12.63	□□□□□ -0.39
MATR3-231	ENST00000502394	ANAPC1	Q9H1A4	1944 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	OBSL1	O75147	1896 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	hCG_1818297	A0A087WSY0	165 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	KCNU1	A8MYU2	1149 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	C3orf80	F5H4A9	247 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	PGRMC1	O00264	195 aa	Known RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	CCL16	O15467	120 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	MSI1	O43347	362 aa	Known RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	TBX18	O95935	607 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	CD48	P09326	243 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	IL4R	P24394	825 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	L1CAM	P32004	1257 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	GBP1	P32455	592 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	CDKN2B	P42772	138 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	MLLT1	Q03111	559 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	ITIH3	Q06033	890 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	NME3	Q13232	169 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	KLF1	Q13351	362 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	PPP2R5D	Q14738	602 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	SIX1	Q15475	284 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	TRIP4	Q15650	581 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	BRMS1L	Q5PSV4	323 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	SEL1L2	Q5TEA6	688 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	SCYL2	Q6P3W7	929 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	TMEM184A	Q6ZMB5	413 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	THSD4	Q6ZMP0	1018 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	SPOCD1	Q6ZMY3	1216 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	CAPZA3	Q96KX2	299 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	FCRL2	Q96LA5	508 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	ZNF512	Q96ME7	567 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	KCTD15	Q96SI1	283 aa	Predicted RBP	12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	MAGEB5	Q9BZ81	275 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	ZNF576	Q9H609	170 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	TLE6	Q9H808	572 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	PCDH18	Q9HCL0	1135 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.62	□□□□□ -0.39	6e-12	■□□□□ 10.5
MATR3-231	ENST00000502394	DPP7	Q9UHL4	492 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	AP4E1	Q9UPM8	1137 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	TLR6	Q9Y2C9	796 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	EFR3B	Q9Y2G0	817 aa		12.62	□□□□□ -0.39
MATR3-231	ENST00000502394	NOTCH4	Q99466	2003 aa		12.61	□□□□□ -0.39
MATR3-231	ENST00000502394	LRRD1	A4D1F6	860 aa		12.61	□□□□□ -0.39
MATR3-231	ENST00000502394	PI4K2B	G5E9Z4	385 aa		12.61	□□□□□ -0.39
MATR3-231	ENST00000502394	COCH	O43405	550 aa		12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms