RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 KCTD10Q9H3F6 313 aa16.88■□□□□ 0.29
MUC1-220ENST00000498431 TOR4AQ9NXH8 423 aa16.88■□□□□ 0.29
MUC1-220ENST00000498431 EIF2B4Q9UI10 523 aaKnown RBP16.88■□□□□ 0.29
MUC1-220ENST00000498431 RASAL2Q9UJF2 1139 aa16.88■□□□□ 0.29
MUC1-220ENST00000498431 NFE2L3Q9Y4A8 694 aa16.88■□□□□ 0.29
MUC1-220ENST00000498431 NUMA1Q14980 2115 aa16.88■□□□□ 0.29
MUC1-220ENST00000498431 METTL12A8MUP2 240 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 BCAT2O15382 392 aaPredicted RBP16.87■□□□□ 0.29
MUC1-220ENST00000498431 CORO1AP31146 461 aaKnown RBP16.87■□□□□ 0.29
MUC1-220ENST00000498431 PIK3CAP42336 1068 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 HLA-BQ31612 363 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 FOXD4L6Q3SYB3 417 aaPredicted RBP16.87■□□□□ 0.29
MUC1-220ENST00000498431 FOXD4L5Q5VV16 416 aaPredicted RBP16.87■□□□□ 0.29
MUC1-220ENST00000498431 TMEM215Q68D42 235 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 FOXD4L3Q6VB84 417 aaPredicted RBP16.87■□□□□ 0.29
MUC1-220ENST00000498431 CCDC186Q7Z3E2 898 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 TMC2Q8TDI7 906 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 FOXD4L4Q8WXT5 416 aaPredicted RBP16.87■□□□□ 0.29
MUC1-220ENST00000498431 ZNF396Q96N95 335 aaPredicted RBP16.87■□□□□ 0.29
MUC1-220ENST00000498431 PNPLA8Q9NP80 782 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 TM7SF3Q9NS93 570 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 RAXQ9Y2V3 346 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 KNL1Q8NG31 2342 aa16.87■□□□□ 0.29
MUC1-220ENST00000498431 A0A1B0GVT2 93 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 SYNCRIPO60506 623 aaKnown RBP16.86■□□□□ 0.29
MUC1-220ENST00000498431 KIF20AO95235 890 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 IGLV3-19P01714 112 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 NR3C1P04150 777 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 ATXN1LP0C7T5 689 aaKnown RBP16.86■□□□□ 0.29
MUC1-220ENST00000498431 ZNF883P0CG24 379 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 CD58P19256 250 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 MATKP42679 507 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 EFEMP1Q12805 493 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 PPP1R26Q5T8A7 1209 aaPredicted RBP16.86■□□□□ 0.29
MUC1-220ENST00000498431 ANKS1BQ7Z6G8 1248 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 FAM124AQ86V42 546 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 HNRNPLLQ8WVV9 542 aaKnown RBP16.86■□□□□ 0.29
MUC1-220ENST00000498431 PRCCQ92733 491 aaPredicted RBP16.86■□□□□ 0.29
MUC1-220ENST00000498431 NT5C1AQ9BXI3 368 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 ELOVL2Q9NXB9 296 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 AGO1Q9UL18 857 aaKnown RBP16.86■□□□□ 0.29
MUC1-220ENST00000498431 PCDHA7Q9UN72 937 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 BTBD3Q9Y2F9 522 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 USP3Q9Y6I4 520 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 TMEM131Q92545 1883 aa16.86■□□□□ 0.29
MUC1-220ENST00000498431 NPC1O15118 1278 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 CER1O95813 267 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 HLA-EP13747 358 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 OXTRP30559 389 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 CHKAP35790 457 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 CSNK1EP49674 416 aaKnown RBP16.85■□□□□ 0.29
MUC1-220ENST00000498431 PSEN1P49768 467 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 ZNF132P52740 706 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 RESP18Q5W5W9 173 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 CEP135Q66GS9 1140 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 DBX2Q6ZNG2 339 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 DENND1CQ8IV53 801 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 ZNF276Q8N554 614 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 TAS1R2Q8TE23 839 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 TMEM174Q8WUU8 243 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 UCMAQ8WVF2 138 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 NUP58Q9BVL2 599 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 DUSP16Q9BY84 665 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 CIPCQ9C0C6 399 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 CLIC5Q9NZA1 410 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 KIAA1522Q9P206 1035 aaPredicted RBP16.85■□□□□ 0.29
MUC1-220ENST00000498431 SERTAD1Q9UHV2 236 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 ZNF510Q9Y2H8 683 aa16.85■□□□□ 0.29
MUC1-220ENST00000498431 MUC22E2RYF6 1773 aaPredicted RBP16.84■□□□□ 0.29
MUC1-220ENST00000498431 GOLGA8CPA6NN73 597 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 PDXKO00764 312 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 IKBKBO14920 756 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 DKK1O94907 266 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 EPHX1P07099 455 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 TRIM49P0CI25 452 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 TRIM49CP0CI26 452 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 RALAP11233 206 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 ACADMP11310 421 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 COG7P83436 770 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 KMT5BQ4FZB7 885 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 ZNF394Q53GI3 561 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 TMPRSS7Q7RTY8 843 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 TADA2BQ86TJ2 420 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 SNX19Q92543 992 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 BBC3Q96PG8 261 aaPredicted RBP16.84■□□□□ 0.29
MUC1-220ENST00000498431 C6orf106Q9H6K1 298 aaPredicted RBP16.84■□□□□ 0.29
MUC1-220ENST00000498431 CYP3A43Q9HB55 503 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 EXOC1Q9NV70 894 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 CABIN1Q9Y6J0 2220 aa16.84■□□□□ 0.29
MUC1-220ENST00000498431 ACTN4O43707 911 aaKnown RBP16.83■□□□□ 0.28
MUC1-220ENST00000498431 ACSL1P33121 698 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 ME1P48163 572 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 GCLMP48507 274 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 VAMP7P51809 220 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 PPP3CAQ08209 521 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 IL27RAQ6UWB1 636 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 LAYNQ6UX15 382 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 SERPINA13PQ6UXR4 307 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 ZNF366Q8N895 744 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 RHBDD1Q8TEB9 315 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms