RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 LINC01465Q8N7H1 131 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 RUBCNQ92622 972 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 SNX18Q96RF0 628 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 MMS19Q96T76 1030 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 KLK15Q9H2R5 256 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 IKZF4Q9H2S9 585 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 SAYSD1Q9NPB0 183 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 FBXO28Q9NVF7 368 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 ASB6Q9NWX5 421 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 PCDHB2Q9Y5E7 798 aa5.49□□□□□ -1.53
VPS36-206ENST00000497149 FNDC1Q4ZHG4 1894 aaPredicted RBP5.49□□□□□ -1.53
VPS36-206ENST00000497149 CCDC187A0A096LP49 1063 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 LOC105369274A0A096LPK9 316 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 LOC102723532A0A0G2JNH3 316 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 EFCAB8A8MWE9 144 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 FAM155BO75949 473 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 JTBO76095 146 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 MT-CO3P00414 261 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 MBPP02686 304 aaPredicted RBP5.48□□□□□ -1.53
VPS36-206ENST00000497149 SLPIP03973 132 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 APEHP13798 732 aaKnown RBP5.48□□□□□ -1.53
VPS36-206ENST00000497149 HSD3B1P14060 373 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 IGHMBP2P38935 993 aaKnown RBP5.48□□□□□ -1.53
VPS36-206ENST00000497149 CCT5P48643 541 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 CDK7P50613 346 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 ZNF569Q5MCW4 686 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 TMEM63BQ5T3F8 832 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 TRIM72Q6ZMU5 477 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 RFX8Q6ZV50 586 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 MOGAT3Q86VF5 341 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 SMAP1Q8IYB5 467 aaPredicted RBP5.48□□□□□ -1.53
VPS36-206ENST00000497149 OR4N4Q8N0Y3 316 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 REPS1Q96D71 796 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 DAZAP1Q96EP5 407 aaKnown RBP5.48□□□□□ -1.53
VPS36-206ENST00000497149 KAZALD1Q96I82 304 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 TRAPPC9Q96Q05 1148 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 AGAP2Q99490 1192 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 MECRQ9BV79 373 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 BRD8Q9H0E9 1235 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 TAF1DQ9H5J8 278 aaPredicted RBP5.48□□□□□ -1.53
VPS36-206ENST00000497149 CCDC134Q9H6E4 229 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 KCNK9Q9NPC2 374 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 GAR1Q9NY12 217 aaKnown RBP5.48□□□□□ -1.53
VPS36-206ENST00000497149 KIF17Q9P2E2 1029 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 FZD4Q9ULV1 537 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 ZBTB1Q9Y2K1 713 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 UBE2J1Q9Y385 318 aaPredicted RBP5.48□□□□□ -1.53
VPS36-206ENST00000497149 INSL6Q9Y581 213 aa5.48□□□□□ -1.53
VPS36-206ENST00000497149 TARM1B6A8C7 271 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 IRAK2O43187 625 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 LARGE1O95461 756 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 C1RP00736 705 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 GPD1P21695 349 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 GALNSP34059 522 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 BIRC3Q13489 604 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 FAM187BQ17R55 369 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 AAK1Q2M2I8 961 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 C4orf46Q504U0 113 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 TTC22Q5TAA0 569 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 C16orf89Q6UX73 402 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 RRAGAQ7L523 313 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 HMGB4Q8WW32 186 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 PPM1EQ8WY54 764 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 NPIPB3Q92617 1050 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 CHFRQ96EP1 664 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 ELAC1Q9H777 363 aaKnown RBP5.47□□□□□ -1.53
VPS36-206ENST00000497149 SEMA4GQ9NTN9 838 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 ASIC5Q9NY37 505 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 VPS4AQ9UN37 437 aa5.47□□□□□ -1.53
VPS36-206ENST00000497149 C19orf53Q9UNZ5 99 aaPredicted RBP5.47□□□□□ -1.53
VPS36-206ENST00000497149 POLR2AP24928 1970 aaKnown RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 TCRBV5S1A1TA0A578 114 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 H0Y3Z8 333 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 H3BNC9 293 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 H7C1Q1 480 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 M0QYT0 321 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 AKAP8O43823 692 aaKnown RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 ATF7P17544 494 aaPredicted RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 DUSP1P28562 367 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 THBS4P35443 961 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 ADD2P35612 726 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 PTH2RP49190 550 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 CLK3P49761 638 aaKnown RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 JAK3P52333 1124 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 RAE1P78406 368 aaKnown RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 SF3A3Q12874 501 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS36-206ENST00000497149 RPS6KA2Q15349 733 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 AMIGO2Q86SJ2 522 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 ANKRD18AQ8IVF6 992 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 OR52L2PQ8NGH6 319 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 OR6Y1Q8NGX8 325 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 MAFAQ8NHW3 353 aaPredicted RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 SPPL3Q8TCT6 385 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 GLMPQ8WWB7 406 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 C3orf49Q96BT1 292 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 SARAFQ96BY9 339 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 REXO5Q96IC2 774 aaKnown RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 FAR2Q96K12 515 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 ABHD10Q9NUJ1 306 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms