RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 POLR3GO15318 223 aaPredicted RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 OPHN1O60890 802 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 ATP2C2O75185 946 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 RARGP13631 454 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 OAS2P29728 719 aaKnown RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 CDC25CP30307 473 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 FAAP100Q0VG06 881 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 EFEMP1Q12805 493 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 ILF2Q12905 390 aaKnown RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 PPP1R15BQ5SWA1 713 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 SPATA17Q96L03 361 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 ROPN1BQ9BZX4 212 aaPredicted RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 CNOT10Q9H9A5 744 aaKnown RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 ROPN1Q9HAT0 212 aaPredicted RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 PCDH18Q9HCL0 1135 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 SAYSD1Q9NPB0 183 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 MSRAQ9UJ68 235 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 CDY1Q9Y6F8 540 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 KLRC2P26717 231 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 STX2P32856 288 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 CDKN2BP42772 138 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 HCAR3P49019 387 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 PPM1LQ5SGD2 360 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 LINC00523Q86TU6 105 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 RIBC1Q8N443 379 aaPredicted RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 WDTC1Q8N5D0 677 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 PNKPQ96T60 521 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 RETREG1Q9H6L5 497 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 MARCH2Q9P0N8 246 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 PAMP19021 973 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 OR1D2P34982 312 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 MARCKSL1P49006 195 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 ITKQ08881 620 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 PPP2R5DQ14738 602 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 DPYSL2Q16555 572 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 PDE12Q6L8Q7 609 aaKnown RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 DDX53Q86TM3 631 aaKnown RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 C7orf61Q8IZ16 206 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 NDUFAF2Q8N183 169 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 PGLYRP2Q96PD5 576 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 SLC2A13Q96QE2 648 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 TKTL2Q9H0I9 626 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 GPATCH2LQ9NWQ4 482 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 TMEM59LQ9UK28 342 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 ANXA9O76027 345 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 CFHP08603 1231 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 HAPLN1P10915 354 aaPredicted RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 MBL2P11226 248 aaPredicted RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 TSHRP16473 764 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 FGFR3P22607 806 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 GABPB1Q06547 395 aaPredicted RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 E2F5Q15329 346 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 RTL10Q7L3V2 364 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 ALLCQ8N6M5 410 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 COLGALT1Q8NBJ5 622 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 LEMD2Q8NC56 503 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 CMASQ8NFW8 434 aaPredicted RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 EDEM1Q92611 657 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 C11orf84Q9BUA3 381 aaPredicted RBP8.66□□□□□ -1.02
USP54-215ENST00000497106 TBX21Q9UL17 535 aa8.66□□□□□ -1.02
USP54-215ENST00000497106 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.65□□□□□ -1.02
USP54-215ENST00000497106 ESYT3A0FGR9 886 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 DNALI1O14645 258 aaPredicted RBP8.65□□□□□ -1.02
USP54-215ENST00000497106 ADRA1BP35368 520 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 ITGA8P53708 1063 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 BBS9Q3SYG4 887 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 SLC45A4Q5BKX6 768 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 ZNF280BQ86YH2 543 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 SMOQ99835 787 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 TRPC7Q9HCX4 862 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 BFARQ9NZS9 450 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 MTRRQ9UBK8 725 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 RSPH14Q9UHP6 348 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 PLAAQ9Y263 795 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 ERI2A8K979 691 aaKnown RBP8.65□□□□□ -1.02
USP54-215ENST00000497106 RASGRF2O14827 1237 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 DDHD2O94830 711 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 GSTA2P09210 222 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 L1CAMP32004 1257 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 HSPA9P38646 679 aaKnown RBP8.65□□□□□ -1.02
USP54-215ENST00000497106 CARSP49589 748 aaKnown RBP8.65□□□□□ -1.02
USP54-215ENST00000497106 GEMIN4P57678 1058 aaKnown RBP8.65□□□□□ -1.02
USP54-215ENST00000497106 CDK16Q00536 496 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 PKDCCQ504Y2 493 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 BEND6Q5SZJ8 279 aaPredicted RBP8.65□□□□□ -1.02
USP54-215ENST00000497106 RFX8Q6ZV50 586 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 PID1Q7Z2X4 250 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 MREGQ8N565 214 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 CXorf38Q8TB03 319 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 ATP2A3Q93084 1043 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 SELENOSQ9BQE4 189 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 NAT9Q9BTE0 207 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 MAGEB5Q9BZ81 275 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 FZD10Q9ULW2 581 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 NEU2Q9Y3R4 380 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 TTLL3Q9Y4R7 772 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 DFFAO00273 331 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 GLUD1P00367 558 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 INHBAP08476 426 aa8.65□□□□□ -1.02
USP54-215ENST00000497106 SLC25A11Q02978 314 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms