RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 VCPIP1Q96JH7 1222 aa4.91□□□□□ -1.62
TRIM4-205ENST00000496896 NAA15Q9BXJ9 866 aaKnown RBP4.91□□□□□ -1.62
TRIM4-205ENST00000496896 SPATA31A5Q5VU36 1347 aa4.91□□□□□ -1.62
TRIM4-205ENST00000496896 SPATA31A7Q8IWB4 1347 aa4.91□□□□□ -1.62
TRIM4-205ENST00000496896 TTC34A8MYJ7 566 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 RRHO14718 337 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 APAF1O14727 1248 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 PMM2O15305 246 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 PLAUP00749 431 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 VIPP01282 170 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 PRF1P14222 555 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 HOXD12P35452 270 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 CCT4P50991 539 aaKnown RBP4.9□□□□□ -1.63
TRIM4-205ENST00000496896 YPEL5P62699 121 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 ZNF91Q05481 1191 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 NSUN2Q08J23 767 aaKnown RBP eCLIP4.9□□□□□ -1.63
TRIM4-205ENST00000496896 KPNB1Q14974 876 aaKnown RBP4.9□□□□□ -1.63
TRIM4-205ENST00000496896 CNGA3Q16281 694 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 MAPKAPK3Q16644 382 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 ARL13BQ3SXY8 428 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 EARS2Q5JPH6 523 aaKnown RBP4.9□□□□□ -1.63
TRIM4-205ENST00000496896 AWAT2Q6E213 333 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 ANKRD13BQ86YJ7 626 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 OR52L2PQ8NGH6 319 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 GLMPQ8WWB7 406 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 ZBTB9Q96C00 473 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 ZFYVE19Q96K21 471 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 FCRL5Q96RD9 977 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 TBCBQ99426 244 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 GATA5Q9BWX5 397 aaPredicted RBP4.9□□□□□ -1.63
TRIM4-205ENST00000496896 PCDHAC1Q9H158 963 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 AGO4Q9HCK5 861 aaKnown RBP4.9□□□□□ -1.63
TRIM4-205ENST00000496896 NECTIN3Q9NQS3 549 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 ARL8BQ9NVJ2 186 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 RGL1Q9NZL6 768 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 ZMYND8Q9ULU4 1186 aaPredicted RBP4.9□□□□□ -1.63
TRIM4-205ENST00000496896 FAM50BQ9Y247 325 aa4.9□□□□□ -1.63
TRIM4-205ENST00000496896 EEA1Q15075 1411 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 CACNA1IQ9P0X4 2223 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 RASA4BC9J798 803 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 ADAM10O14672 748 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 HNRNPDLO14979 420 aaKnown RBP4.89□□□□□ -1.63
TRIM4-205ENST00000496896 ZSCAN9O15535 394 aaPredicted RBP4.89□□□□□ -1.63
TRIM4-205ENST00000496896 RASA4O43374 803 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 DRD1P21728 446 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 RPS6KB1P23443 525 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 GNALP38405 381 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 IGHMBP2P38935 993 aaKnown RBP4.89□□□□□ -1.63
TRIM4-205ENST00000496896 SLC12A2P55011 1212 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 SEMA3BQ13214 749 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 STIM1Q13586 685 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 GLE1Q53GS7 698 aaKnown RBP4.89□□□□□ -1.63
TRIM4-205ENST00000496896 TMEM196Q5HYL7 178 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 RAP1GAP2Q684P5 730 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 HIBCHQ6NVY1 386 aaPredicted RBP4.89□□□□□ -1.63
TRIM4-205ENST00000496896 RBM44Q6ZP01 1051 aaKnown RBP4.89□□□□□ -1.63
TRIM4-205ENST00000496896 NRACQ8N912 160 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 WIPF2Q8TF74 440 aaPredicted RBP4.89□□□□□ -1.63
TRIM4-205ENST00000496896 PMM1Q92871 262 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 CCDC136Q96JN2 1154 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 SENP7Q9BQF6 1050 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 TRMOQ9BU70 441 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 TM2D2Q9BX73 214 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 TMEM184CQ9NVA4 438 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 MAN2B2Q9Y2E5 1009 aa4.89□□□□□ -1.63
TRIM4-205ENST00000496896 EIF4G1Q04637 1599 aaKnown RBP4.89□□□□□ -1.63
TRIM4-205ENST00000496896 WRNQ14191 1432 aaPredicted RBP eCLIP4.89□□□□□ -1.63
TRIM4-205ENST00000496896 MYMKA6NI61 221 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 C16orf96A6NNT2 1141 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 DHHO43323 396 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 SGPL1O95470 568 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 SLC3A2P08195 630 aaKnown RBP4.88□□□□□ -1.63
TRIM4-205ENST00000496896 FOXG1P55316 489 aaPredicted RBP4.88□□□□□ -1.63
TRIM4-205ENST00000496896 B4GALNT1Q00973 533 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 ARL6IP4Q66PJ3 421 aaKnown RBP4.88□□□□□ -1.63
TRIM4-205ENST00000496896 CCDC144NLQ6NUI1 221 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 ACSM6Q6P461 480 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 TECPR1Q7Z6L1 1165 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 CCAR1Q8IX12 1150 aaKnown RBP4.88□□□□□ -1.63
TRIM4-205ENST00000496896 ARFGAP1Q8N6T3 406 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 AKAP1Q92667 903 aaKnown RBP eCLIP4.88□□□□□ -1.63
TRIM4-205ENST00000496896 GRAMD1AQ96CP6 724 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 ZNF845Q96IR2 970 aaPredicted RBP4.88□□□□□ -1.63
TRIM4-205ENST00000496896 ERVK-5Q9HDB9 667 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 TM7SF3Q9NS93 570 aa4.88□□□□□ -1.63
TRIM4-205ENST00000496896 GXYLT2A0PJZ3 443 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 C2CD4BA6NLJ0 364 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 PRYO14603 147 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 CAND2O75155 1236 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 NDST3O95803 873 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 GLP2RO95838 553 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 TNFSF4P23510 183 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 NDUFS1P28331 727 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 HOXA7P31268 230 aaPredicted RBP4.87□□□□□ -1.63
TRIM4-205ENST00000496896 IDUAP35475 653 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 ME1P48163 572 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 ZNF84P51523 738 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 PMS2P11Q13670 270 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 GPR162Q16538 588 aa4.87□□□□□ -1.63
TRIM4-205ENST00000496896 SLC35G1Q2M3R5 365 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms