RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 PMS2CLQ68D20 193 aa16.42■□□□□ 0.22
HDAC4-213ENST00000496347 TOGARAM2Q6ZUX3 1019 aa16.42■□□□□ 0.22
HDAC4-213ENST00000496347 DGLUCYQ7Z3D6 616 aa16.42■□□□□ 0.22
HDAC4-213ENST00000496347 OLIG1Q8TAK6 271 aa16.42■□□□□ 0.22
HDAC4-213ENST00000496347 STK32AQ8WU08 396 aa16.42■□□□□ 0.22
HDAC4-213ENST00000496347 EDEM1Q92611 657 aa16.42■□□□□ 0.22
HDAC4-213ENST00000496347 CRACR2AQ9BSW2 395 aa16.42■□□□□ 0.22
HDAC4-213ENST00000496347 TPSD1Q9BZJ3 242 aa16.42■□□□□ 0.22
HDAC4-213ENST00000496347 DUSP15Q9H1R2 295 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-213ENST00000496347 BCCIPQ9P287 314 aaKnown RBP eCLIP16.42■□□□□ 0.22
HDAC4-213ENST00000496347 STOML2Q9UJZ1 356 aa16.42■□□□□ 0.22
HDAC4-213ENST00000496347 IGLV3-27P01718 113 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 GNA15P30679 374 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 GBP1P32455 592 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 MPLP40238 635 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 GPD2P43304 727 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 RING1Q06587 406 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 NNTQ13423 1086 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 BYSLQ13895 437 aaKnown RBP16.41■□□□□ 0.22
HDAC4-213ENST00000496347 EIF4HQ15056 248 aaKnown RBP16.41■□□□□ 0.22
HDAC4-213ENST00000496347 CT47A1Q5JQC4 288 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-213ENST00000496347 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 NUGGCQ68CJ6 796 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 ANKS1BQ7Z6G8 1248 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 CREBRFQ8IUR6 639 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 CHPFQ8IZ52 775 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 HMGB4Q8WW32 186 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 SHC3Q92529 594 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 GBP4Q96PP9 640 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 GABRG3Q99928 467 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 SLC2A11Q9BYW1 496 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 PLK2Q9NYY3 685 aa16.41■□□□□ 0.22
HDAC4-213ENST00000496347 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.41■□□□□ 0.22
HDAC4-213ENST00000496347 MUC22E2RYF6 1773 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-213ENST00000496347 PRRT4C9JH25 899 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 GFRA2O00451 464 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 MSI1O43347 362 aaKnown RBP16.4■□□□□ 0.22
HDAC4-213ENST00000496347 GABBR2O75899 941 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 CISD3P0C7P0 127 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 ZNF806P0C7X5 589 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 PON1P27169 355 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 PLA2G2CQ5R387 149 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 SDE2Q6IQ49 451 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 BEND5Q7L4P6 421 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 P2RY11Q96G91 374 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 SERPINB11Q96P15 392 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 RTKNQ9BST9 563 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 IRX2Q9BZI1 471 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-213ENST00000496347 ARRDC1-AS1Q9H2J1 176 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 ZDHHC4Q9NPG8 344 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 VPS45Q9NRW7 570 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 SFMBT1Q9UHJ3 866 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 HCN2Q9UL51 889 aa16.4■□□□□ 0.22
HDAC4-213ENST00000496347 A0A1W2PQF6 199 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 DCLK1O15075 740 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 ZBTB24O43167 697 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-213ENST00000496347 THAP12O43422 761 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 LETM1O95202 739 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-213ENST00000496347 CALCAP01258 141 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 SLC9A1P19634 815 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 HOXD9P28356 352 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-213ENST00000496347 P2RY2P41231 377 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 PDCLQ13371 301 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 MPPE1Q53F39 396 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 ADGRF1Q5T601 910 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 UNC45BQ8IWX7 931 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 C12orf50Q8NA57 414 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-213ENST00000496347 CLEC4CQ8WTT0 213 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 DDI1Q8WTU0 396 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 UCMAQ8WVF2 138 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 ST7Q9NRC1 585 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 LMBRD1Q9NUN5 540 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 GON4LQ3T8J9 2241 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 CEP192Q8TEP8 1941 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 PI4KAP42356 2102 aa16.39■□□□□ 0.21
HDAC4-213ENST00000496347 BECN2A8MW95 431 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 PIK3R2O00459 728 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 IRAK2O43187 625 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 NCAM1P13591 858 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 BCKDHBP21953 392 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 SLC11A2P49281 568 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 LIMK1P53667 647 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 STARD3Q14849 445 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 AASDHQ4L235 1098 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-213ENST00000496347 VWA3BQ502W6 1294 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 SPDYCQ5MJ68 293 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 MPP7Q5T2T1 576 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 DENND1BQ6P3S1 775 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 GJB7Q6PEY0 223 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 ZNF557Q8N988 423 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-213ENST00000496347 FAM149B1Q96BN6 582 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 PIWIL1Q96J94 861 aaKnown RBP16.38■□□□□ 0.21
HDAC4-213ENST00000496347 TUBGCP2Q9BSJ2 902 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 SLC4A5Q9BY07 1137 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 MIS12Q9H081 205 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 NDST4Q9H3R1 872 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 CD248Q9HCU0 757 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 CALCOCO1Q9P1Z2 691 aa16.38■□□□□ 0.21
HDAC4-213ENST00000496347 TLR6Q9Y2C9 796 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms