RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ACBD6Q9BR61 282 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 HERPUD2Q9BSE4 406 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 ARHGAP39Q9C0H5 1083 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 EPN3Q9H201 632 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 PNPLA8Q9NP80 782 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 DMAP1Q9NPF5 467 aaPredicted RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 INTS9Q9NV88 658 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 SAMD15Q9P1V8 674 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 PSMC3IPQ9P2W1 217 aaPredicted RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 FETUBQ9UGM5 382 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 SLC24A2Q9UI40 661 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 XPO7Q9UIA9 1087 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 INPP5FQ9Y2H2 1132 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 GPSM3Q9Y4H4 160 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 HEY1Q9Y5J3 304 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 CLUHO75153 1309 aa7.18□□□□□ -1.26
USP39-219ENST00000496047 ATXN2Q99700 1313 aaKnown RBP7.18□□□□□ -1.26
USP39-219ENST00000496047 ANKRD36A6QL64 1941 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 GMNCA6NCL1 334 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 C9IYK1 514 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 M0QYT0 321 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 EEF2KO00418 725 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 NCAM2O15394 837 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 MTSS1O43312 755 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 TLL1O43897 1013 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 B3GAT3O94766 335 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 LTFP02788 710 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 SHBGP04278 402 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 GSTA2P09210 222 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 COL6A1P12109 1028 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 ELNP15502 786 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 PECAM1P16284 738 aaPredicted RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 KRT15P19012 456 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 ACAT1P24752 427 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 LMO2P25791 158 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 IVDP26440 423 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 CTGFP29279 349 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 CYP2C18P33260 490 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 SLCO1A2P46721 670 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 HDAC4P56524 1084 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 MAP3K7CLP57077 242 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 TPI1P60174 286 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 AUHQ13825 339 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 LPIN1Q14693 890 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 TMED2Q15363 201 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 KYNUQ16719 465 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 LONRF1Q17RB8 773 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 SLC45A4Q5BKX6 768 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 INTS6LQ5JSJ4 861 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 OVOS1Q6IE37 1185 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 DCLRE1AQ6PJP8 1040 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 LRRC31Q6UY01 552 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 AGMOQ6ZNB7 445 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 CLEC20AQ6ZU45 233 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 SLC24A5Q71RS6 500 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 CPLX4Q7Z7G2 160 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 ZNF598Q86UK7 904 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 ZC3H18Q86VM9 953 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 TAX1BP1Q86VP1 789 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 OSTM1Q86WC4 334 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 ECHDC2Q86YB7 292 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 TDRPQ86YL5 185 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 SPATA2LQ8IUW3 424 aaPredicted RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 FUKQ8N0W3 1084 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 DEFB106AQ8N104 65 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 SCML4Q8N228 414 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 ARHGAP18Q8N392 663 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 ARFGAP1Q8N6T3 406 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 SLC7A14Q8TBB6 771 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 CD99L2Q8TCZ2 262 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 TFB1MQ8WVM0 346 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 CENPIQ92674 756 aaPredicted RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 PRCCQ92733 491 aaPredicted RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 APBB2Q92870 758 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 ARHGEF2Q92974 986 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 LPPQ93052 612 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 RNF34Q969K3 372 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 NTAN1Q96AB6 310 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 LRRC39Q96DD0 335 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 SMC6Q96SB8 1091 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 PLCD4Q9BRC7 762 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 BRD8Q9H0E9 1235 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 NRDE2Q9H7Z3 1164 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 PPANQ9NQ55 473 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 DNAJC17Q9NVM6 304 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 LGALS13Q9UHV8 139 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 LRFN2Q9ULH4 789 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 FZD10Q9ULW2 581 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 SMG5Q9UPR3 1016 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 NYNRINQ9P2P1 1898 aaKnown RBP7.17□□□□□ -1.26
USP39-219ENST00000496047 DENND4CQ5VZ89 1909 aa7.17□□□□□ -1.26
USP39-219ENST00000496047 IQANK1A0A1B0GTG1 560 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 GOLGA6L7A0A1B0GV03 622 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 ZBBXA8MT70 800 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 TMEM189-UBE2V1I3L0A0 370 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 M0QZQ0 153 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 AP3B1O00203 1094 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 TNFRSF10AO00220 468 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 TULP2O00295 520 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 ALOX15BO15296 676 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms