RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	ACRBP	Q8NEB7	543 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	OR14C36	Q8NHC7	312 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	TRAPPC12	Q8WVT3	735 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	DNAJB3	Q8WWF6	145 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	CRYGN	Q8WXF5	182 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	PIBF1	Q8WXW3	757 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	P2RX5	Q93086	422 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	APIP	Q96GX9	242 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	OSBPL1A	Q9BXW6	950 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	BTBD1	Q9H0C5	482 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	ADAM7	Q9H2U9	754 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	MTG2	Q9H4K7	406 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	ZMAT3	Q9HA38	289 aa	Known RBP	4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	CARS2	Q9HA77	564 aa	Known RBP	4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	KCNK12	Q9HB15	430 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	RXFP1	Q9HBX9	757 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	UCKL1	Q9NWZ5	548 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	ERAP1	Q9NZ08	941 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	CA14	Q9ULX7	337 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	GTF2A1L	Q9UNN4	478 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	MTF2	Q9Y483	593 aa	Predicted RBP	4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	TRPV2	Q9Y5S1	764 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	RBM8A	Q9Y5S9	174 aa	Known RBP	4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	NOTCH2	Q04721	2471 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	LAMA1	P25391	3075 aa		4.74	□□□□□ -1.65
VPS52-222	ENST00000495981	NFASC	O94856	1347 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	IGLV3-22	A0A075B6J6	115 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	hCG_1642624	A0A1W2PR95	340 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	CFAP69	A5D8W1	941 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	LRRC14B	A6NHZ5	514 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	ADAMTS3	O15072	1205 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	CYP26A1	O43174	497 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	SLC26A4	O43511	780 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	FRS3	O43559	492 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	TLR5	O60602	858 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	KIN	O60870	393 aa	Known RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	OPHN1	O60890	802 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	C22orf31	O95567	290 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	SCG2	P13521	617 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	TSHR	P16473	764 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	PRKCA	P17252	672 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	SDHB	P21912	280 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	SMARCA1	P28370	1054 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	HOXC13	P31276	330 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	CHKA	P35790	457 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	IL12RB1	P42701	662 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	PPM1F	P49593	454 aa	Predicted RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	ACTR2	P61160	394 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	TRAF1	Q13077	416 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	TDG	Q13569	410 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	PLCB4	Q15147	1175 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	RARS2	Q5T160	578 aa	Known RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	PLPP4	Q5VZY2	271 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	TLDC1	Q6P9B6	456 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	C19orf48	Q6RUI8	117 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	RALYL	Q86SE5	291 aa	Known RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	PCGF5	Q86SE9	256 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	DAAM2	Q86T65	1068 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	SGMS1	Q86VZ5	419 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	PROSER1	Q86XN7	944 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	RAB11FIP4	Q86YS3	637 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	DCP2	Q8IU60	420 aa	Known RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	ZDHHC13	Q8IUH4	622 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	TRIM48	Q8IWZ4	208 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	OXR1	Q8N573	874 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	LINC01465	Q8N7H1	131 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	RNF152	Q8N8N0	203 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	NETO2	Q8NC67	525 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	ZBTB44	Q8NCP5	570 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	NUP43	Q8NFH3	380 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	NCOA7	Q8NI08	942 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	CTCFL	Q8NI51	663 aa	Predicted RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	SMARCC2	Q8TAQ2	1214 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	ASB11	Q8WXH4	323 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	HOXB13	Q92826	284 aa	Predicted RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	NELL1	Q92832	810 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	RRP36	Q96EU6	259 aa	Known RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	PGBD1	Q96JS3	809 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	HRASLS5	Q96KN8	279 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	SCLT1	Q96NL6	688 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	LSG1	Q9H089	658 aa	Known RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	VPS11	Q9H270	941 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	EPC1	Q9H2F5	836 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	JADE2	Q9NQC1	790 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	DUSP12	Q9UNI6	340 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	CORO2B	Q9UQ03	480 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	NR2E1	Q9Y466	385 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	SQOR	Q9Y6N5	450 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	COL1A2	P08123	1366 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	COL4A3	Q01955	1670 aa		4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	MYH9	P35579	1960 aa	Known RBP	4.73	□□□□□ -1.65
VPS52-222	ENST00000495981	PIEZO2	Q9H5I5	2752 aa		4.72	□□□□□ -1.65
VPS52-222	ENST00000495981	COL4A2	P08572	1712 aa		4.72	□□□□□ -1.65
VPS52-222	ENST00000495981	PATJ	Q8NI35	1801 aa		4.72	□□□□□ -1.65
VPS52-222	ENST00000495981	EVPL	Q92817	2033 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms