RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PRRT4C9JH25 899 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 GABBR2O75899 941 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 LTFP02788 710 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 KRT5P13647 590 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 P2RY2P41231 377 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 RGS7P49802 495 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 MPPE1Q53F39 396 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 SPDYCQ5MJ68 293 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 PMS2CLQ68D20 193 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 BEND5Q7L4P6 421 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 CREBRFQ8IUR6 639 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 EDEM1Q92611 657 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 SPACA7Q96KW9 195 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 GABRG3Q99928 467 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 TRIM62Q9BVG3 475 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 NUP62CLQ9H1M0 184 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 PLK2Q9NYY3 685 aa25.3■■□□□ 1.64
HLA-C-209ENST00000495835 ZBTB24O43167 697 aaPredicted RBP25.29■■□□□ 1.64
HLA-C-209ENST00000495835 HOXB2P14652 356 aa25.29■■□□□ 1.64
HLA-C-209ENST00000495835 GBP1P32455 592 aa25.29■■□□□ 1.64
HLA-C-209ENST00000495835 ATXN1P54253 815 aaKnown RBP25.29■■□□□ 1.64
HLA-C-209ENST00000495835 RING1Q06587 406 aa25.29■■□□□ 1.64
HLA-C-209ENST00000495835 TOGARAM2Q6ZUX3 1019 aa25.29■■□□□ 1.64
HLA-C-209ENST00000495835 UNC45BQ8IWX7 931 aa25.29■■□□□ 1.64
HLA-C-209ENST00000495835 CHPFQ8IZ52 775 aa25.29■■□□□ 1.64
HLA-C-209ENST00000495835 ZNF606Q8WXB4 792 aa25.29■■□□□ 1.64
HLA-C-209ENST00000495835 AZIN2Q96A70 460 aa25.29■■□□□ 1.64
HLA-C-209ENST00000495835 BCCIPQ9P287 314 aaKnown RBP eCLIP25.29■■□□□ 1.64
HLA-C-209ENST00000495835 SFMBT1Q9UHJ3 866 aa25.29■■□□□ 1.64
HLA-C-209ENST00000495835 THADAQ6YHU6 1953 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 TCRBV21S2A2A0A5A6 115 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 SLC30A4O14863 429 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 DCLK1O15075 740 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 SLC9A1P19634 815 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 MPLP40238 635 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 MTIF2P46199 727 aaKnown RBP25.28■■□□□ 1.64
HLA-C-209ENST00000495835 LIMK1P53667 647 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 MAN2A1Q16706 1144 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 ADGRF1Q5T601 910 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 EGFLAMQ63HQ2 1017 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 C12orf50Q8NA57 414 aaPredicted RBP25.28■■□□□ 1.64
HLA-C-209ENST00000495835 UCMAQ8WVF2 138 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 CRACR2AQ9BSW2 395 aa25.28■■□□□ 1.64
HLA-C-209ENST00000495835 BCLAF3A2AJT9 711 aaKnown RBP25.27■■□□□ 1.64
HLA-C-209ENST00000495835 TIMM44O43615 452 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 IGLV3-27P01718 113 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 GNA15P30679 374 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 EIF4HQ15056 248 aaKnown RBP25.27■■□□□ 1.64
HLA-C-209ENST00000495835 NUGGCQ68CJ6 796 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 DDI1Q8WTU0 396 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 HMGB4Q8WW32 186 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 BHMTQ93088 406 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 PIWIL1Q96J94 861 aaKnown RBP25.27■■□□□ 1.64
HLA-C-209ENST00000495835 SLC4A5Q9BY07 1137 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 ZDHHC4Q9NPG8 344 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 ABCA7Q8IZY2 2146 aa25.27■■□□□ 1.64
HLA-C-209ENST00000495835 LAMA1P25391 3075 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 NUP205Q92621 2012 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.26■■□□□ 1.63
HLA-C-209ENST00000495835 A0A1W2PQF6 199 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 LETM1O95202 739 aaPredicted RBP25.26■■□□□ 1.63
HLA-C-209ENST00000495835 PON1P27169 355 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 NNTQ13423 1086 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 MPP7Q5T2T1 576 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 ANKS1BQ7Z6G8 1248 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 TMEM110Q86TL2 294 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 PGBD3Q8N328 593 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 SHC3Q92529 594 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 P2RY11Q96G91 374 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 CD248Q9HCU0 757 aa25.26■■□□□ 1.63
HLA-C-209ENST00000495835 IRAK2O43187 625 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 ZNF217O75362 1048 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 DPP6P42658 865 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 ENPP2Q13822 863 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 MAP7D1Q3KQU3 841 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 DPCR1Q3MIW9 517 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 SCUBE3Q8IX30 993 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 ZNF557Q8N988 423 aaPredicted RBP25.25■■□□□ 1.63
HLA-C-209ENST00000495835 IPO4Q8TEX9 1081 aaKnown RBP25.25■■□□□ 1.63
HLA-C-209ENST00000495835 TMA16Q96EY4 203 aaKnown RBP25.25■■□□□ 1.63
HLA-C-209ENST00000495835 SERPINB11Q96P15 392 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 MIS12Q9H081 205 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 ST7Q9NRC1 585 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 LMBRD1Q9NUN5 540 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 THAP10Q9P2Z0 257 aaPredicted RBP25.25■■□□□ 1.63
HLA-C-209ENST00000495835 INVSQ9Y283 1065 aa25.25■■□□□ 1.63
HLA-C-209ENST00000495835 THAP12O43422 761 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 CAVIN2O95810 425 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 CALCAP01258 141 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 GABRG2P18507 467 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 SLC11A2P49281 568 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 CREB5Q02930 508 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 AASDHQ4L235 1098 aaPredicted RBP25.24■■□□□ 1.63
HLA-C-209ENST00000495835 SLC36A4Q6YBV0 504 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 LPCAT2Q7L5N7 544 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 CLEC4CQ8WTT0 213 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 DDX1Q92499 740 aaKnown RBP25.24■■□□□ 1.63
HLA-C-209ENST00000495835 ACOX2Q99424 681 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 NDST4Q9H3R1 872 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 ELOVL2Q9NXB9 296 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms