RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 IGLV3-25P01717 112 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 IGLV3-27P01718 113 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 GPD1P21695 349 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 CCR1P32246 355 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 RFC1P35251 1148 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-235ENST00000495515 CHKAP35790 457 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 SLC11A2P49281 568 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 GALCP54803 685 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 AMPD2Q01433 879 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 DEUP1Q05D60 604 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 NME3Q13232 169 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 RUNX3Q13761 415 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 SPA17Q15506 151 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 EMC1Q8N766 993 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 NT5C3BQ969T7 300 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 AZIN2Q96A70 460 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 PGAP3Q96FM1 320 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-235ENST00000495515 ZFYVE19Q96K21 471 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 MCEEQ96PE7 176 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 DDX50Q9BQ39 737 aaKnown RBP17.8■□□□□ 0.44
HDAC6-235ENST00000495515 SPTLC3Q9NUV7 552 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 MYO1AQ9UBC5 1043 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 WNT16Q9UBV4 365 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 NENFQ9UMX5 172 aa17.8■□□□□ 0.44
HDAC6-235ENST00000495515 MUC3AQ02505 3323 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 SYNJ2BP-COX16A0A087WUM0 186 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 NRDCO43847 1150 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 ADH1CP00326 375 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 RDXP35241 583 aaKnown RBP17.79■□□□□ 0.44
HDAC6-235ENST00000495515 PTPN9P43378 593 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 EML3Q32P44 896 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 ITPRIPL2Q3MIP1 535 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 PPP1R15BQ5SWA1 713 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 Q6ZNB5 142 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 DNAAF5Q86Y56 855 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 DENND1CQ8IV53 801 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 BBS7Q8IWZ6 715 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 ATP6V0D2Q8N8Y2 350 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 JOSD2Q8TAC2 188 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 EDAQ92838 391 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 MSANTD3Q96H12 275 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 SLC39A13Q96H72 371 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 FCRL2Q96LA5 508 aaPredicted RBP17.79■□□□□ 0.44
HDAC6-235ENST00000495515 CFAP57Q96MR6 1250 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 THAP2Q9H0W7 228 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 LINC00597Q9H2U6 94 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 EBF3Q9H4W6 596 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 COX16Q9P0S2 106 aa17.79■□□□□ 0.44
HDAC6-235ENST00000495515 ARNTLO00327 626 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 SCAMP3O14828 347 aaKnown RBP17.78■□□□□ 0.44
HDAC6-235ENST00000495515 ATMINO43313 823 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-235ENST00000495515 GREM1O60565 184 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 GJB6O95452 261 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 KLKB1P03952 638 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 GLULP15104 373 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 ZNF143P52747 638 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-235ENST00000495515 MLLT6P55198 1093 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-235ENST00000495515 PITX1P78337 314 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-235ENST00000495515 SIGLEC14Q08ET2 396 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 PPP2R5DQ14738 602 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 ZC3H12AQ5D1E8 599 aaKnown RBP17.78■□□□□ 0.44
HDAC6-235ENST00000495515 BRMS1LQ5PSV4 323 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 TRIM68Q6AZZ1 485 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 C1orf228Q6PIY5 440 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 STRADAQ7RTN6 431 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 ADGRG2Q8IZP9 1017 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 WBP2Q969T9 261 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 EXOC4Q96A65 974 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 ASIC4Q96FT7 647 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 SHDQ96IW2 340 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 BTN2A3PQ96KV6 586 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 TBCBQ99426 244 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 CNPY3Q9BT09 278 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 C8orf33Q9H7E9 229 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-235ENST00000495515 ECT2Q9H8V3 914 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 AGO1Q9UL18 857 aaKnown RBP17.78■□□□□ 0.44
HDAC6-235ENST00000495515 INTUQ9ULD6 942 aa17.78■□□□□ 0.44
HDAC6-235ENST00000495515 EPN1Q9Y6I3 576 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-235ENST00000495515 TMEM191CA6NGB0 347 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 EIF3CLB5ME19 914 aaKnown RBP17.77■□□□□ 0.44
HDAC6-235ENST00000495515 CYP1A2P05177 515 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 TMEM253P0C7T8 217 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 ARSAP15289 507 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 MAGEA1P43355 309 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 RPL7AP62424 266 aaKnown RBP17.77■□□□□ 0.44
HDAC6-235ENST00000495515 ATP11AP98196 1134 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 PRKCQQ04759 706 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 TNK2Q07912 1038 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 EIF4EBP2Q13542 120 aaPredicted RBP17.77■□□□□ 0.44
HDAC6-235ENST00000495515 CCDC14Q49A88 953 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 SLC44A4Q53GD3 710 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 ADGRF1Q5T601 910 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 CCDC112Q8NEF3 446 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 FNIP1Q8TF40 1166 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 EIF3CQ99613 913 aaKnown RBP17.77■□□□□ 0.44
HDAC6-235ENST00000495515 NCAPGQ9BPX3 1015 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 IRX2Q9BZI1 471 aaPredicted RBP17.77■□□□□ 0.44
HDAC6-235ENST00000495515 WDCPQ9H6R7 721 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 HPS4Q9NQG7 708 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 ARHGEF3Q9NR81 526 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms