RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CADM1Q9BY67 442 aaKnown RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 SENP1Q9P0U3 644 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 PSAT1Q9Y617 370 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 GRIK4Q16099 956 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 SOWAHAQ2M3V2 549 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 RALGPS1Q5JS13 557 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 ILDR2Q71H61 639 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 APPL2Q8NEU8 664 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 SCG3Q8WXD2 468 aaKnown RBP13.88□□□□□ -0.19
GPC1-209ENST00000495100 UTP4Q969X6 686 aaKnown RBP13.88□□□□□ -0.19
GPC1-209ENST00000495100 KCNK16Q96T55 309 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 PRDM12Q9H4Q4 367 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 POMCP01189 267 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 ETS2P15036 469 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 PTPN4P29074 926 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 STIP1P31948 543 aaKnown RBP13.88□□□□□ -0.19
GPC1-209ENST00000495100 ZNF143P52747 638 aaPredicted RBP13.88□□□□□ -0.19
GPC1-209ENST00000495100 TAP1Q03518 808 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 SWT1Q5T5J6 900 aaKnown RBP13.88□□□□□ -0.19
GPC1-209ENST00000495100 FAM219BQ5XKK7 198 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 DNERQ8NFT8 737 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 GPR152Q8TDT2 470 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 GBP5Q96PP8 586 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 TASP1Q9H6P5 420 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 RNPEPL1Q9HAU8 725 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 RBPJLQ9UBG7 517 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 STOML1Q9UBI4 398 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 NUP205Q92621 2012 aa13.88□□□□□ -0.19
GPC1-209ENST00000495100 CILPO75339 1184 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
GPC1-209ENST00000495100 NELFEP18615 380 aaKnown RBP13.87□□□□□ -0.19
GPC1-209ENST00000495100 ETFBP38117 255 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 PKNOX1P55347 436 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 PLIN5Q00G26 463 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 MBTD1Q05BQ5 628 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 ZNF460Q14592 562 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 WSCD1Q658N2 575 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 TRNP1Q6NT89 227 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 MIEF2Q96C03 454 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 ZMAT2Q96NC0 199 aaKnown RBP13.87□□□□□ -0.19
GPC1-209ENST00000495100 WDR55Q9H6Y2 383 aaPredicted RBP13.87□□□□□ -0.19
GPC1-209ENST00000495100 IARS2Q9NSE4 1012 aaKnown RBP13.87□□□□□ -0.19
GPC1-209ENST00000495100 SLC24A2Q9UI40 661 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 EEF2KO00418 725 aaKnown RBP13.87□□□□□ -0.19
GPC1-209ENST00000495100 ITM2AO43736 263 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 SLC12A2P55011 1212 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 TRIP10Q15642 601 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 STRA8Q7Z7C7 330 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 PIGZQ86VD9 579 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 NAT8LQ8N9F0 302 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.19
GPC1-209ENST00000495100 APOPT1Q96IL0 206 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 B3GALT6Q96L58 329 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 AGAP2Q99490 1192 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 PDZD7Q9H5P4 517 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 NRDE2Q9H7Z3 1164 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 PDLIM7Q9NR12 457 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 MAP3K20Q9NYL2 800 aaKnown RBP13.87□□□□□ -0.19
GPC1-209ENST00000495100 WDR35Q9P2L0 1181 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 TLK1Q9UKI8 766 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 STARD13Q9Y3M8 1113 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 V9GYQ6 96 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 CCL15-CCL14A0A0B4J2E2 113 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 ATP6V1B1P15313 513 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 CALB2P22676 271 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 TPI1P60174 286 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 ASPHQ12797 758 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 CCL15Q16663 113 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 CERCAMQ5T4B2 595 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 TMCO4Q5TGY1 634 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 RNF220Q5VTB9 566 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 IZUMO2Q6UXV1 221 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 RPS27LQ71UM5 84 aaKnown RBP13.87□□□□□ -0.19
GPC1-209ENST00000495100 OR6P1Q8NGX9 317 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 STK32AQ8WU08 396 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 TFB1MQ8WVM0 346 aaKnown RBP13.87□□□□□ -0.19
GPC1-209ENST00000495100 TAS2R1Q9NYW7 299 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 NUMBLQ9Y6R0 609 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 DLEC1Q9Y238 1755 aa13.87□□□□□ -0.19
GPC1-209ENST00000495100 TTC24A2A3L6 582 aaPredicted RBP13.86□□□□□ -0.19
GPC1-209ENST00000495100 MEIS3P2A8K0S8 358 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 C9JVG2 144 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 CYP3A5P20815 502 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 ZNF268Q14587 947 aaPredicted RBP13.86□□□□□ -0.19
GPC1-209ENST00000495100 BOLA3Q53S33 107 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 DPY19L2Q6NUT2 758 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 RBM15BQ8NDT2 890 aaKnown RBP13.86□□□□□ -0.19
GPC1-209ENST00000495100 C10orf82Q8WW14 230 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 MFSD3Q96ES6 412 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 CHST12Q9NRB3 414 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 TPST1O60507 370 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 APOEP02649 317 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 TGM2P21980 687 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 TKTL1P51854 596 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 AP3M2P53677 418 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 ACSBG2Q5FVE4 666 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 HFE2Q6ZVN8 426 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 TFAP2DQ7Z6R9 452 aa13.86□□□□□ -0.19
GPC1-209ENST00000495100 ZSCAN18Q8TBC5 510 aaPredicted RBP13.86□□□□□ -0.19
GPC1-209ENST00000495100 DCAKDQ8WVC6 231 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms