RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 RAB44Q7Z6P3 723 aaPredicted RBP12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 PROSER1Q86XN7 944 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 WDR49Q8IV35 697 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 HDDC3Q8N4P3 179 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 CCDC150Q8NCX0 1101 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 CCDC26Q8TAB7 109 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 MDM1Q8TC05 714 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 PARD3BQ8TEW8 1205 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 C8orf48Q96LL4 319 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 FAM81BQ96LP2 452 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 PCMTD1Q96MG8 357 aaPredicted RBP12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 HSPA12BQ96MM6 686 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 NAP1L5Q96NT1 182 aaPredicted RBP12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 PPP1R9BQ96SB3 815 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 SNX25Q9H3E2 840 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 TMEM8AQ9HCN3 771 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 ACACAQ13085 2346 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 KNL1Q8NG31 2342 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 TRIM66O15016 1216 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 AP5Z1O43299 807 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 TNNC2P02585 160 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 DLATP10515 647 aaKnown RBP12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 TNNI1P19237 187 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 TRIM21P19474 475 aaKnown RBP12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 FMO5P49326 533 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 GAD2Q05329 585 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 EXOC3L4Q17RC7 722 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 FIGNQ5HY92 759 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 KRT39Q6A163 491 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 SMYD5Q6GMV2 418 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 PAQR9Q6ZVX9 377 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 TMC6Q7Z403 805 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 SLCO6A1Q86UG4 719 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 BHMTQ93088 406 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 FBXO32Q969P5 355 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 CCDC127Q96BQ5 260 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 BBC3Q96PG8 261 aaPredicted RBP12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 IMPG2Q9BZV3 1241 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 IL21RQ9HBE5 538 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 GMIPQ9P107 970 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 GPSM3Q9Y4H4 160 aa12.37□□□□□ -0.43
CSNK1E-212ENST00000494610 PTPRBP23467 1997 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 FLNBO75369 2602 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 ASXL3Q9C0F0 2248 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 FAM221BA6H8Z2 402 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 A8MXQ7 604 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 UPK3BL1B0FP48 263 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 UPK3BL2E5RIL1 263 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 SLC9A3R1O14745 358 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 GREM1O60565 184 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 GJB3O75712 270 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 BEST1O76090 585 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 FTH1P19P0C7X4 201 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 TRIM49P0CI25 452 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 TRIM49CP0CI26 452 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 YWHAQP27348 245 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 PBX1P40424 430 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 EIF2DP41214 584 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 PDE6CP51160 858 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 MYL6P60660 151 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 CLDN10P78369 228 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 SYCP1Q15431 976 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 TRIP6Q15654 476 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 DUOXA2Q1HG44 320 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 PLEKHG6Q3KR16 790 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 TPGS1Q6ZTW0 290 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 RGL4Q8IZJ4 473 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 TERB1Q8NA31 727 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 ZNF397Q8NF99 534 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 NEK11Q8NG66 645 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 HNRNPLLQ8WVV9 542 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 CRELD1Q96HD1 420 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 SLITRK1Q96PX8 696 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 EDEM3Q9BZQ6 932 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 SDCBP2Q9H190 292 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 NUCKS1Q9H1E3 243 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 PLCB1Q9NQ66 1216 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 SPHK2Q9NRA0 654 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 CACNA2D2Q9NY47 1150 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 DEC1Q9P2X7 70 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 NXF1Q9UBU9 619 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 NUDT5Q9UKK9 219 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 SH3BP1Q9Y3L3 701 aa12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 R3HCC1Q9Y3T6 440 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-212ENST00000494610 A0A1W2PQJ5 194 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 E2F8A0AVK6 867 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 LRRIQ3A6PVS8 624 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 MDM4O15151 490 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 HOXC11O43248 304 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 PFKLP17858 780 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 NTSR1P30989 418 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms