RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 DKK4Q9UBT3 224 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 TUBE1Q9UJT0 475 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 PPIEQ9UNP9 301 aaKnown RBP7.17□□□□□ -1.26
SNX13-210ENST00000494402 C2CD2Q9Y426 696 aa7.17□□□□□ -1.26
SNX13-210ENST00000494402 H7C4K7 107 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 GCOM1H8Y6P7 765 aaPredicted RBP7.16□□□□□ -1.26
SNX13-210ENST00000494402 CTDSP2O14595 271 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 IKBKBO14920 756 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 PRPF4O43172 522 aaKnown RBP eCLIP7.16□□□□□ -1.26
SNX13-210ENST00000494402 RPP40O75818 363 aaKnown RBP7.16□□□□□ -1.26
SNX13-210ENST00000494402 PSMD10O75832 226 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 BCAS2O75934 225 aaPredicted RBP7.16□□□□□ -1.26
SNX13-210ENST00000494402 DNAJB5O75953 348 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 SASH1O94885 1247 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 LY86O95711 162 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 NFICP08651 508 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 SUPT20HL2P0C7V6 817 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 SELLP14151 372 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 FAHP16930 419 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 CASP3P42574 277 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 WNT3P56703 355 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 GMFBP60983 142 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 RALGDSQ12967 914 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 GPS1Q13098 491 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 SGCGQ13326 291 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 CLCA4Q14CN2 919 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 MEP1BQ16820 701 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 GEN1Q17RS7 908 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 SUPT20HL1Q3ZLR7 823 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 C19orf54Q5BKX5 351 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 RNFT1Q5M7Z0 435 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 ZPBP2Q6X784 338 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 ILDR2Q71H61 639 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 DZIP1Q86YF9 867 aaKnown RBP7.16□□□□□ -1.26
SNX13-210ENST00000494402 RTL3Q8N8U3 475 aaKnown RBP7.16□□□□□ -1.26
SNX13-210ENST00000494402 DUSP19Q8WTR2 217 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 RAPGEF4Q8WZA2 1011 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 VPS50Q96JG6 964 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 PPP1R10Q96QC0 940 aaKnown RBP7.16□□□□□ -1.26
SNX13-210ENST00000494402 AGAP2Q99490 1192 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 ABCG8Q9H221 673 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 SLC25A32Q9H2D1 315 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 ST6GALNAC4Q9H4F1 302 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 MBNL1Q9NR56 388 aaKnown RBP7.16□□□□□ -1.26
SNX13-210ENST00000494402 LIN7CQ9NUP9 197 aaKnown RBP7.16□□□□□ -1.26
SNX13-210ENST00000494402 ABCB8Q9NUT2 735 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 RLIMQ9NVW2 624 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 AATFQ9NY61 560 aaKnown RBP eCLIP7.16□□□□□ -1.26
SNX13-210ENST00000494402 NINJ2Q9NZG7 142 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 CWC15Q9P013 229 aaKnown RBP7.16□□□□□ -1.26
SNX13-210ENST00000494402 HCN3Q9P1Z3 774 aa7.16□□□□□ -1.26
SNX13-210ENST00000494402 A0A0A6YYK5 440 aaPredicted RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 A0A0B4J203 849 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 GOLGA6L10A0A0M3HER8 536 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 FAM237BA0A1B0GVD1 139 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 DYNC1LI2O43237 492 aaPredicted RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 PEX11AO75192 247 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 RECQL5O94762 991 aaPredicted RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 NTRK1P04629 796 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 GJB1P08034 283 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 XRCC6P12956 609 aaKnown RBP eCLIP7.15□□□□□ -1.26
SNX13-210ENST00000494402 FERP16591 822 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 TMOD1P28289 359 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 CPA2P48052 419 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 HNMTP50135 292 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 NPY4RP50391 375 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 ZNF81P51508 661 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 SRSF11Q05519 484 aaKnown RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 SF3A3Q12874 501 aaKnown RBP eCLIP7.15□□□□□ -1.26
SNX13-210ENST00000494402 MAJINQ3KP22 176 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 TBRG1Q3YBR2 411 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 CRY2Q49AN0 593 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 ZNF766Q5HY98 468 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 COLEC12Q5KU26 742 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 CST9LP1Q5W188 147 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 GRAMD4Q6IC98 578 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 FIP1L1Q6UN15 594 aaKnown RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 SYNE3Q6ZMZ3 975 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 TMPRSS7Q7RTY8 843 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 ADGRG6Q86SQ4 1221 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 SYCP3Q8IZU3 236 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 SIX6OS1Q8N1H7 587 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 MRPL43Q8N983 215 aaKnown RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 SMARCC2Q8TAQ2 1214 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 CASKIN2Q8WXE0 1202 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 SEC14L1Q92503 715 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 DDX17Q92841 729 aaKnown RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 ELP4Q96EB1 424 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 GSDMAQ96QA5 445 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 TXN2Q99757 166 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 SOX7Q9BT81 388 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 AMNQ9BXJ7 453 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 MRPL1Q9BYD6 325 aaKnown RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 HAPLN2Q9GZV7 340 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 MROH8Q9H579 483 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 DNAJC18Q9H819 358 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 TTC12Q9H892 705 aaPredicted RBP7.15□□□□□ -1.26
SNX13-210ENST00000494402 XPNPEP3Q9NQH7 507 aa7.15□□□□□ -1.26
SNX13-210ENST00000494402 POLE3Q9NRF9 147 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms