RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 C3orf20Q8ND61 904 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 OLIG1Q8TAK6 271 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 FAM3CQ92520 227 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 RNF34Q969K3 372 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 TRIM11Q96F44 468 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 DEF6Q9H4E7 631 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 SPHK2Q9NRA0 654 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 DDIT4Q9NX09 232 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 COX16Q9P0S2 106 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 ARHGAP20Q9P2F6 1191 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 AGO1Q9UL18 857 aaKnown RBP12.99□□□□□ -0.33
TRA2A-209ENST00000494255 A0A0C4DFX4 3053 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 KANSL1LA0AUZ9 987 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 PRR33A8MZF0 331 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 M0QYT0 321 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 LATS1O95835 1130 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 PDGFBP01127 241 aaPredicted RBP12.98□□□□□ -0.33
TRA2A-209ENST00000494255 GJA4P35212 333 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 EIF4A3P38919 411 aaKnown RBP12.98□□□□□ -0.33
TRA2A-209ENST00000494255 SULT1E1P49888 294 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 PITX1P78337 314 aaPredicted RBP12.98□□□□□ -0.33
TRA2A-209ENST00000494255 GAD2Q05329 585 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 NME3Q13232 169 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 UBXN2BQ14CS0 331 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 LY6G5CQ5SRR4 150 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 WDR59Q6PJI9 974 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 SND1Q7KZF4 910 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRA2A-209ENST00000494255 SUGP1Q8IWZ8 645 aaKnown RBP12.98□□□□□ -0.33
TRA2A-209ENST00000494255 FBXL6Q8N531 539 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 NELL2Q99435 816 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 DDX50Q9BQ39 737 aaKnown RBP12.98□□□□□ -0.33
TRA2A-209ENST00000494255 DDX23Q9BUQ8 820 aaKnown RBP12.98□□□□□ -0.33
TRA2A-209ENST00000494255 TMEM51Q9NW97 253 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 SLC12A6Q9UHW9 1150 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 TMEM59LQ9UK28 342 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 BDP1A6H8Y1 2624 aa12.98□□□□□ -0.33
TRA2A-209ENST00000494255 SSU72P8A0A1W2PR75 194 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 OTOL1A6NHN0 477 aaPredicted RBP12.97□□□□□ -0.33
TRA2A-209ENST00000494255 ADCY5O95622 1261 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 F9P00740 461 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 IGLV3-25P01717 112 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 CYBBP04839 570 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 CD72P21854 359 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 FLT3P36888 993 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 DEUP1Q05D60 604 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 ANO4Q32M45 955 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 SLC25A52Q3SY17 297 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 RHBDF2Q6PJF5 856 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 TPGS1Q6ZTW0 290 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 CPXM2Q8N436 756 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 EMC1Q8N766 993 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 FCRL2Q96LA5 508 aaPredicted RBP12.97□□□□□ -0.33
TRA2A-209ENST00000494255 NPY6RQ99463 290 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 LTB4R2Q9NPC1 389 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 C11orf16Q9NQ32 467 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 PARVAQ9NVD7 372 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 NDRG2Q9UN36 371 aaKnown RBP12.97□□□□□ -0.33
TRA2A-209ENST00000494255 PAXBP1Q9Y5B6 917 aa12.97□□□□□ -0.33
TRA2A-209ENST00000494255 A0A087X0T9 212 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 SIGLEC16A6NMB1 481 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 GOLGA6L6A8MZA4 724 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 NCAM2O15394 837 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 AKR1B10O60218 316 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 ACSL4O60488 711 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 MOCS2O96007 188 aaPredicted RBP12.96□□□□□ -0.33
TRA2A-209ENST00000494255 FAM228BP0C875 321 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 MYBL1P10243 752 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 PDGFRAP16234 1089 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 DESP17661 470 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 ABCB4P21439 1286 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 RRM1P23921 792 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 CDC25BP30305 580 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 SDC4P31431 198 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 CCR1P32246 355 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 VCPP55072 806 aaKnown RBP12.96□□□□□ -0.33
TRA2A-209ENST00000494255 MTA1Q13330 715 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.33
TRA2A-209ENST00000494255 PON2Q15165 354 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 ZC3H12AQ5D1E8 599 aaKnown RBP12.96□□□□□ -0.33
TRA2A-209ENST00000494255 CCDC122Q5T0U0 273 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 ADGRF1Q5T601 910 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
TRA2A-209ENST00000494255 ALKBH5Q6P6C2 394 aaKnown RBP12.96□□□□□ -0.33
TRA2A-209ENST00000494255 DCUN1D2Q6PH85 259 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 TMEM25Q86YD3 366 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 ATP6V0D2Q8N8Y2 350 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 ZNF653Q96CK0 615 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 SLC39A13Q96H72 371 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 BTN2A3PQ96KV6 586 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 CCDC42Q96M95 316 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 CFAP57Q96MR6 1250 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 TBCBQ99426 244 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 BBS2Q9BXC9 721 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 ISCUQ9H1K1 167 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRA2A-209ENST00000494255 SIT1Q9Y3P8 196 aa12.96□□□□□ -0.33
TRA2A-209ENST00000494255 C2CD4BA6NLJ0 364 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 FAM170BA6NMN3 283 aa12.96□□□□□ -0.34
TRA2A-209ENST00000494255 NEDD8-MDP1E9PL57 170 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms