RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 PAXBP1Q9Y5B6 917 aa15.16■□□□□ 0.02
BRCA1-223ENST00000494123 E2F8A0AVK6 867 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 CCP110O43303 1012 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 IGLV3-25P01717 112 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 APOEP02649 317 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 ASGR2P07307 311 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 SLC2A3P11169 496 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 TFE3P19532 575 aaPredicted RBP15.15■□□□□ 0.02
BRCA1-223ENST00000494123 CORO1AP31146 461 aaKnown RBP15.15■□□□□ 0.02
BRCA1-223ENST00000494123 RDXP35241 583 aaKnown RBP15.15■□□□□ 0.02
BRCA1-223ENST00000494123 GRM2Q14416 872 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 UNC45BQ8IWX7 931 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 SLC35G2Q8TBE7 412 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 ADAMTS19Q8TE59 1207 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 FNIP1Q8TF40 1166 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 FAM172AQ8WUF8 416 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 PGAP3Q96FM1 320 aaPredicted RBP15.15■□□□□ 0.02
BRCA1-223ENST00000494123 PLA2G2FQ9BZM2 168 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 TMEM51Q9NW97 253 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 IP6K2Q9UHH9 426 aa15.15■□□□□ 0.02
BRCA1-223ENST00000494123 REXO2Q9Y3B8 237 aaKnown RBP15.15■□□□□ 0.02
BRCA1-223ENST00000494123 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 MYO1FO00160 1098 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 SLC9A3R1O14745 358 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 SCAMP3O14828 347 aaKnown RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 CCR1P32246 355 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 NOP2P46087 812 aaKnown RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 OGDHQ02218 1023 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 ZC3H12AQ5D1E8 599 aaKnown RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 OTUD1Q5VV17 481 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 STRADAQ7RTN6 431 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 RIN3Q8TB24 985 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 ZNF830Q96NB3 372 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 RPP25Q9BUL9 199 aaKnown RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 TRMT61BQ9BVS5 477 aaKnown RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 TRIM7Q9C029 511 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 OSGEPQ9NPF4 335 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 PIGVQ9NUD9 493 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 SLC12A6Q9UHW9 1150 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 LCMT1Q9UIC8 334 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 ZNF510Q9Y2H8 683 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 RNF8O76064 485 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 MOCS2O96007 188 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 IGLV3-27P01718 113 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 CCDC175P0C221 793 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 GDI1P31150 447 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 IFNAR2P48551 515 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 FCHO2Q0JRZ9 810 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 KIF5AQ12840 1032 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 ARHGAP29Q52LW3 1261 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 SH3PXD2AQ5TCZ1 1133 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 HTR3DQ70Z44 454 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 DENND1CQ8IV53 801 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 SLC44A3Q8N4M1 653 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 ATP6V0D2Q8N8Y2 350 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 WBP2Q969T9 261 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 SLC39A13Q96H72 371 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 BTBD6Q96KE9 485 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 FCRL2Q96LA5 508 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 LRRC3BQ96PB8 259 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 ADAM33Q9BZ11 813 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 WDCPQ9H6R7 721 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 DUS2Q9NX74 493 aaKnown RBP15.14■□□□□ 0.01
BRCA1-223ENST00000494123 CALCOCO1Q9P1Z2 691 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 TBC1D14Q9P2M4 693 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 TFR2Q9UP52 801 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 ADGRG1Q9Y653 693 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 WNT6Q9Y6F9 365 aa15.14■□□□□ 0.01
BRCA1-223ENST00000494123 ENDOD1O94919 500 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 SLC11A2P49281 568 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 CXCR3P49682 368 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 NAP1L1P55209 391 aaKnown RBP15.13■□□□□ 0.01
BRCA1-223ENST00000494123 TDGQ13569 410 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 PIGHQ14442 188 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-223ENST00000494123 PPP2R5DQ14738 602 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 BRMS1LQ5PSV4 323 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 SCYL2Q6P3W7 929 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 FAM131BQ86XD5 332 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 BBS7Q8IWZ6 715 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 GJD3Q8N144 294 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 KIAA1958Q8N8K9 716 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 OSCP1Q8WVF1 389 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 CENPIQ92674 756 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-223ENST00000494123 KCNF1Q9H3M0 494 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 BRD9Q9H8M2 597 aa15.13■□□□□ 0.01
BRCA1-223ENST00000494123 A0A0A6YYK5 440 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-223ENST00000494123 RCCD1A6NED2 376 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 TMEM110-MUSTN1A8MSY1 372 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 CHADO15335 359 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 PJA2O43164 708 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 MTA2O94776 668 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 KLKB1P03952 638 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 ATXN1P54253 815 aaKnown RBP15.12■□□□□ 0.01
BRCA1-223ENST00000494123 ZNF252P-AS1Q0IIN9 211 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 MTA1Q13330 715 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 EIF4EBP2Q13542 120 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-223ENST00000494123 ACAP1Q15027 740 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 PDGFRLQ15198 375 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 ARL13BQ3SXY8 428 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms