RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 NELL1Q92832 810 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 AZIN2Q96A70 460 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 SERPINB11Q96P15 392 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 ERGIC2Q96RQ1 377 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 DDX50Q9BQ39 737 aaKnown RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 GANQ9H2C0 597 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 POPDC2Q9HBU9 364 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 NLRC4Q9NPP4 1024 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 FAM207AQ9NSI2 230 aaPredicted RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 DNAJC17Q9NVM6 304 aaKnown RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 CYTH4Q9UIA0 394 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 NAALADL1Q9UQQ1 740 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 CCDC163A0A0D9SF12 145 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 K7ESF4 209 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 CACNG3O60359 315 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 GFRA3O60609 400 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 GFPT2O94808 682 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 FYNP06241 537 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 CCDC172P0C7W6 258 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 TDGF1P13385 188 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 TIE1P35590 1138 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 SOX5P35711 763 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 FNTBP49356 437 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 DGKGP49619 791 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 CDK17Q00537 523 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 SLC6A3Q01959 620 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 KDSRQ06136 332 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 RING1Q06587 406 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 NNTQ13423 1086 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 DMC1Q14565 340 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 E2F5Q15329 346 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 HSF5Q4G112 596 aaPredicted RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 DCAF6Q58WW2 860 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 EOGTQ5NDL2 527 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 C10orf76Q5T2E6 689 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 ADGRF1Q5T601 910 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 TAF3Q5VWG9 929 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 SYPL2Q5VXT5 272 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 NUGGCQ68CJ6 796 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 HEATR6Q6AI08 1181 aaKnown RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 OR6B2Q6IFH4 312 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 SDE2Q6IQ49 451 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 PKN3Q6P5Z2 889 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 TOGARAM2Q6ZUX3 1019 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 CACNA2D4Q7Z3S7 1137 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 TRMT11Q7Z4G4 463 aaKnown RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 ERICH1Q86X53 443 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 DHX40Q8IX18 779 aaKnown RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 FAM217AQ8IXS0 508 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 PHTF2Q8N3S3 785 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 C1orf131Q8NDD1 294 aaKnown RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 DQX1Q8TE96 717 aaKnown RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 USP33Q8TEY7 942 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 EZH1Q92800 747 aaPredicted RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 C18orf8Q96DM3 657 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 TMA16Q96EY4 203 aaKnown RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 CPXM1Q96SM3 734 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 SLC2A11Q9BYW1 496 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 IRX2Q9BZI1 471 aaPredicted RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 HSD3B7Q9H2F3 369 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 RTN4Q9NQC3 1192 aaKnown RBP7.27□□□□□ -1.25
TOP3A-207ENST00000493648 ASNSD1Q9NWL6 643 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 PLK2Q9NYY3 685 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 SLC12A6Q9UHW9 1150 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 STOML2Q9UJZ1 356 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 RAB23Q9ULC3 237 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 TLR6Q9Y2C9 796 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 SIK3Q9Y2K2 1263 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 FANCMQ8IYD8 2048 aa7.27□□□□□ -1.25
TOP3A-207ENST00000493648 TYW5A2RUC4 315 aaKnown RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 PRR23AA6NEV1 266 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 GOLGA6L19H0YKK7 550 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 ZBTB24O43167 697 aaPredicted RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 IRAK2O43187 625 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 MSI1O43347 362 aaKnown RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 ACSL4O60488 711 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 TSPAN3O60637 253 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 LILRB5O75023 590 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 HSF2BPO75031 334 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 ALDH1A2O94788 518 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 KLF8O95600 359 aaPredicted RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 APBB3O95704 486 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 LSM8O95777 96 aaKnown RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 TRUB2O95900 331 aaKnown RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 SERPINC1P01008 464 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 PENKP01210 267 aaPredicted RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 IGLV3-27P01718 113 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 APOEP02649 317 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 ERBB2P04626 1255 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 MMEP08473 750 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 CISD3P0C7P0 127 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 SLC2A3P11169 496 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 ATP1A3P13637 1013 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 CDH5P33151 784 aaPredicted RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 NOS2P35228 1153 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 KIR2DL1P43626 348 aaPredicted RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 DGKEP52429 567 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 JAM2P57087 298 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 CDR2Q01850 454 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 MTA1Q13330 715 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms