RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 CPNE8Q86YQ8 564 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 DENND1CQ8IV53 801 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 YAF2Q8IY57 180 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 ZNF276Q8N554 614 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 CELF5Q8N6W0 485 aaKnown RBP16.39■□□□□ 0.21
HPS4-216ENST00000493455 FGF14Q92915 247 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 PLD4Q96BZ4 506 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 RSPRY1Q96DX4 576 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 ZFRQ96KR1 1074 aaKnown RBP16.39■□□□□ 0.21
HPS4-216ENST00000493455 TSGA10Q9BZW7 698 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 GOLPH3Q9H4A6 298 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 LIMD1Q9UGP4 676 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 PCSK1NQ9UHG2 260 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 SALL4Q9UJQ4 1053 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 TLR6Q9Y2C9 796 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 HBS1LQ9Y450 684 aaKnown RBP16.39■□□□□ 0.21
HPS4-216ENST00000493455 HYOU1Q9Y4L1 999 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 ZFP37Q9Y6Q3 630 aaPredicted RBP16.39■□□□□ 0.21
HPS4-216ENST00000493455 NUMBLQ9Y6R0 609 aa16.39■□□□□ 0.21
HPS4-216ENST00000493455 SOBPA7XYQ1 873 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 KRT86O43790 486 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 STC2O76061 302 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 FCARP24071 287 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 CC2D1AQ6P1N0 951 aaPredicted RBP16.38■□□□□ 0.21
HPS4-216ENST00000493455 MTSS1LQ765P7 747 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 DDX42Q86XP3 938 aaKnown RBP eCLIP16.38■□□□□ 0.21
HPS4-216ENST00000493455 RIN3Q8TB24 985 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 BPIFB1Q8TDL5 484 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 ADAMTS19Q8TE59 1207 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 FCRL2Q96LA5 508 aaPredicted RBP16.38■□□□□ 0.21
HPS4-216ENST00000493455 PLA2G2FQ9BZM2 168 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 KIF9Q9HAQ2 790 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 TMPRSS4Q9NRS4 437 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 EPS15L1Q9UBC2 864 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 C5orf42Q9H799 3197 aa16.38■□□□□ 0.21
HPS4-216ENST00000493455 A0A0A6YYK5 440 aaPredicted RBP16.37■□□□□ 0.21
HPS4-216ENST00000493455 ZSCAN12O43309 604 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 F9P00740 461 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 IGLV3-25P01717 112 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 ASGR2P07307 311 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 CCR1P32246 355 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 GGCXP38435 758 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 HARS2P49590 506 aaKnown RBP16.37■□□□□ 0.21
HPS4-216ENST00000493455 KPNA1P52294 538 aaPredicted RBP16.37■□□□□ 0.21
HPS4-216ENST00000493455 HDAC4P56524 1084 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 USP4Q13107 963 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 PIGHQ14442 188 aaPredicted RBP16.37■□□□□ 0.21
HPS4-216ENST00000493455 ZNF77Q15935 545 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 VITQ6UXI7 678 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 STRADAQ7RTN6 431 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 DAAM2Q86T65 1068 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 PLCD3Q8N3E9 789 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 FNIP1Q8TF40 1166 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 NT5C3BQ969T7 300 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 ZFYVE19Q96K21 471 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 RPP25Q9BUL9 199 aaKnown RBP16.37■□□□□ 0.21
HPS4-216ENST00000493455 TKTL2Q9H0I9 626 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 WDCPQ9H6R7 721 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 ZWILCHQ9H900 591 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 XPO7Q9UIA9 1087 aaKnown RBP16.37■□□□□ 0.21
HPS4-216ENST00000493455 WNT6Q9Y6F9 365 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 KIF26AQ9ULI4 1882 aaPredicted RBP16.37■□□□□ 0.21
HPS4-216ENST00000493455 PRUNE2Q8WUY3 3088 aa16.37■□□□□ 0.21
HPS4-216ENST00000493455 USP27XA6NNY8 438 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 SPOPO43791 374 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 BUB1BO60566 1050 aaPredicted RBP16.36■□□□□ 0.21
HPS4-216ENST00000493455 PROSCO94903 275 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 TCF4P15884 667 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 ARHGAP25P42331 645 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 VCPP55072 806 aaKnown RBP16.36■□□□□ 0.21
HPS4-216ENST00000493455 HTR4Q13639 388 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 ZFYVE27Q5T4F4 411 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 NUGGCQ68CJ6 796 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 ADHFE1Q8IWW8 467 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 UNC45BQ8IWX7 931 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 BBS7Q8IWZ6 715 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 C17orf53Q8N3J3 647 aaPredicted RBP16.36■□□□□ 0.21
HPS4-216ENST00000493455 CCDC185Q8N715 623 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 ATP6V0D2Q8N8Y2 350 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 TPCN2Q8NHX9 752 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 ATXN2LQ8WWM7 1075 aaKnown RBP16.36■□□□□ 0.21
HPS4-216ENST00000493455 LRRC3BQ96PB8 259 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 ASB2Q96Q27 587 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 SIK2Q9H0K1 926 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.36■□□□□ 0.211e-5■■■■□ 23.6
HPS4-216ENST00000493455 GPATCH2LQ9NWQ4 482 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 SLC12A6Q9UHW9 1150 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 SNX10Q9Y5X0 201 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 MYO10Q9HD67 2058 aa16.36■□□□□ 0.21
HPS4-216ENST00000493455 GOLGA6L7A0A1B0GV03 622 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 BTNL10A8MVZ5 291 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 TRDMT1O14717 391 aaKnown RBP16.35■□□□□ 0.21
HPS4-216ENST00000493455 PRPSAP2O60256 369 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 LRCH4O75427 683 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 MTA2O94776 668 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 KLKB1P03952 638 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 SLC2A3P11169 496 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 MIPP30301 263 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 GDI1P31150 447 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 IFNAR2P48551 515 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms