RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 MED7O43513 233 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 TIMM44O43615 452 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 CAVIN2O95810 425 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 KRT5P13647 590 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 HOXB2P14652 356 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 ERCC5P28715 1186 aaPredicted RBP12□□□□□ -0.49
LRTM1-202ENST00000493075 GBP1P32455 592 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 ACADSBP45954 432 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 RGS7P49802 495 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 MAP7D1Q3KQU3 841 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 MPPE1Q53F39 396 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 CT47A1Q5JQC4 288 aaPredicted RBP12□□□□□ -0.49
LRTM1-202ENST00000493075 EGFLAMQ63HQ2 1017 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 TRIM65Q6PJ69 517 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 GBP6Q6ZN66 633 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 BEND5Q7L4P6 421 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 UNC45BQ8IWX7 931 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 CHPFQ8IZ52 775 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 HMGB4Q8WW32 186 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 ZNF606Q8WXB4 792 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 EDEM1Q92611 657 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 GOLGA1Q92805 767 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 P2RY11Q96G91 374 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 PIWIL1Q96J94 861 aaKnown RBP12□□□□□ -0.49
LRTM1-202ENST00000493075 SPACA7Q96KW9 195 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 THAP9Q9H5L6 903 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 CD248Q9HCU0 757 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 ZDHHC4Q9NPG8 344 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 PLK2Q9NYY3 685 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 BCCIPQ9P287 314 aaKnown RBP eCLIP12□□□□□ -0.49
LRTM1-202ENST00000493075 SFMBT1Q9UHJ3 866 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 INVSQ9Y283 1065 aa12□□□□□ -0.49
LRTM1-202ENST00000493075 DCHS1Q96JQ0 3298 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 ZNF217O75362 1048 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 IGLV3-27P01718 113 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 LTFP02788 710 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 GABRG2P18507 467 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 DPP6P42658 865 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 CREB5Q02930 508 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 RING1Q06587 406 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 ENPP2Q13822 863 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 EIF4HQ15056 248 aaKnown RBP11.99□□□□□ -0.49
LRTM1-202ENST00000493075 SF3A2Q15428 464 aaKnown RBP11.99□□□□□ -0.49
LRTM1-202ENST00000493075 EXOC3L4Q17RC7 722 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 AASDHQ4L235 1098 aaPredicted RBP11.99□□□□□ -0.49
LRTM1-202ENST00000493075 ADGRF1Q5T601 910 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 LPCAT2Q7L5N7 544 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 TMEM110Q86TL2 294 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 PGBD3Q8N328 593 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 IPO4Q8TEX9 1081 aaKnown RBP11.99□□□□□ -0.49
LRTM1-202ENST00000493075 DDI1Q8WTU0 396 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 UCMAQ8WVF2 138 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 DDX1Q92499 740 aaKnown RBP11.99□□□□□ -0.49
LRTM1-202ENST00000493075 BHMTQ93088 406 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 TMA16Q96EY4 203 aaKnown RBP11.99□□□□□ -0.49
LRTM1-202ENST00000493075 ACOX2Q99424 681 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 TRIM62Q9BVG3 475 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 ELOVL2Q9NXB9 296 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 THAP10Q9P2Z0 257 aaPredicted RBP11.99□□□□□ -0.49
LRTM1-202ENST00000493075 APEX2Q9UBZ4 518 aa11.99□□□□□ -0.49
LRTM1-202ENST00000493075 DMXL1Q9Y485 3027 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 TM4SF5O14894 197 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 MAP3K13O43283 966 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 GDF9O60383 454 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 LETM1O95202 739 aaPredicted RBP11.98□□□□□ -0.49
LRTM1-202ENST00000493075 SLC9A1P19634 815 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 BCKDHBP21953 392 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 PON1P27169 355 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 ANP32AP39687 249 aaKnown RBP11.98□□□□□ -0.49
LRTM1-202ENST00000493075 WASP42768 502 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 NNTQ13423 1086 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 CCDC6Q16204 474 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 TPD52L1Q16890 204 aaPredicted RBP11.98□□□□□ -0.49
LRTM1-202ENST00000493075 GEN1Q17RS7 908 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 MPP7Q5T2T1 576 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 NUGGCQ68CJ6 796 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 SLC36A4Q6YBV0 504 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 ANKS1BQ7Z6G8 1248 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 METTL3Q86U44 580 aaKnown RBP11.98□□□□□ -0.49
LRTM1-202ENST00000493075 CREBRFQ8IUR6 639 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 FAM114A1Q8IWE2 563 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 SCUBE3Q8IX30 993 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 SPDYE1Q8NFV5 336 aaPredicted RBP11.98□□□□□ -0.49
LRTM1-202ENST00000493075 RLN3Q8WXF3 142 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 CRACR2AQ9BSW2 395 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 DACH1Q9UI36 760 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 MBD1Q9UIS9 605 aaPredicted RBP11.98□□□□□ -0.49
LRTM1-202ENST00000493075 STON1Q9Y6Q2 735 aa11.98□□□□□ -0.49
LRTM1-202ENST00000493075 MED19A0JLT2 244 aaPredicted RBP11.97□□□□□ -0.49
LRTM1-202ENST00000493075 DCDC2BA2VCK2 349 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 PIK3R2O00459 728 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 IRAK2O43187 625 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 CALCAP01258 141 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 FYNP06241 537 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 HOXD9P28356 352 aaPredicted RBP11.97□□□□□ -0.49
LRTM1-202ENST00000493075 GNA15P30679 374 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 MTIF2P46199 727 aaKnown RBP11.97□□□□□ -0.49
LRTM1-202ENST00000493075 SLC11A2P49281 568 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 TBX4P57082 545 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms