RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ZNF165P49910 485 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 BNC1Q01954 994 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 TUBB2AQ13885 445 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 WDR72Q3MJ13 1102 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 SYCP2LQ5T4T6 812 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 RRAGBQ5VZM2 374 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 DBX2Q6ZNG2 339 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 HTR3DQ70Z44 454 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 TMPRSS7Q7RTY8 843 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 FOXJ1Q92949 421 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 SMARCE1Q969G3 411 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 P2RY11Q96G91 374 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 TUBB2BQ9BVA1 445 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 ZDHHC5Q9C0B5 715 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 PANK4Q9NVE7 773 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 CACNA2D2Q9NY47 1150 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 MARK1Q9P0L2 795 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 GMIPQ9P107 970 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 FBXO2Q9UK22 296 aaPredicted RBP13.84□□□□□ -0.19
HDAC3-213ENST00000492506 NFE2L3Q9Y4A8 694 aa13.84□□□□□ -0.19
HDAC3-213ENST00000492506 A0A087X0B3 334 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 A8MXQ7 604 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 GFRA2O00451 464 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 NDUFS2O75306 463 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 ZNF883P0CG24 379 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 IRF1P10914 325 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 TYRP14679 529 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 GNSP15586 552 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 SYT1P21579 422 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 NAA30Q147X3 362 aaPredicted RBP13.83□□□□□ -0.2
HDAC3-213ENST00000492506 STX1AQ16623 288 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 ANO6Q4KMQ2 910 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 WDR45BQ5MNZ6 344 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 SDE2Q6IQ49 451 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 BRAPQ7Z569 592 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 METTL3Q86U44 580 aaKnown RBP13.83□□□□□ -0.2
HDAC3-213ENST00000492506 ZNF516Q92618 1163 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 LRIG1Q96JA1 1093 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 CLIC6Q96NY7 704 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 KLF16Q9BXK1 252 aaPredicted RBP13.83□□□□□ -0.2
HDAC3-213ENST00000492506 NAT10Q9H0A0 1025 aaKnown RBP13.83□□□□□ -0.2
HDAC3-213ENST00000492506 XYLT2Q9H1B5 865 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 GDPD2Q9HCC8 539 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 WSB2Q9NYS7 404 aaPredicted RBP13.83□□□□□ -0.2
HDAC3-213ENST00000492506 CLIC4Q9Y696 253 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 KNTC1P50748 2209 aa13.83□□□□□ -0.2
HDAC3-213ENST00000492506 TENM4Q6N022 2769 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 A0A1B0GTW7 788 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 CCDC151A5D8V7 595 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 KCNJ18B7U540 433 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 NEDD8-MDP1E9PL57 170 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 ZBTB24O43167 697 aaPredicted RBP13.82□□□□□ -0.2
HDAC3-213ENST00000492506 STAU1O95793 577 aaKnown RBP13.82□□□□□ -0.2
HDAC3-213ENST00000492506 TBX18O95935 607 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 CD6P30203 668 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 SLC5A3P53794 718 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 CCZ1BP86790 482 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 CCZ1P86791 482 aaPredicted RBP13.82□□□□□ -0.2
HDAC3-213ENST00000492506 FAM35AQ86V20 835 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 MARCH9Q86YJ5 346 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 ZCCHC9Q8N567 271 aaKnown RBP13.82□□□□□ -0.2
HDAC3-213ENST00000492506 ZMIZ2Q8NF64 920 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 C1orf216Q8TAB5 229 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 HPS3Q969F9 1004 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 TOE1Q96GM8 510 aaKnown RBP13.82□□□□□ -0.2
HDAC3-213ENST00000492506 BBS2Q9BXC9 721 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 MKRN2Q9H000 416 aaKnown RBP13.82□□□□□ -0.2
HDAC3-213ENST00000492506 ITM2CQ9NQX7 267 aa13.82□□□□□ -0.2
HDAC3-213ENST00000492506 USP36Q9P275 1121 aaKnown RBP13.82□□□□□ -0.2
HDAC3-213ENST00000492506 FNDC3AQ9Y2H6 1198 aaKnown RBP13.82□□□□□ -0.2
HDAC3-213ENST00000492506 SRPRBQ9Y5M8 271 aaKnown RBP13.82□□□□□ -0.2
HDAC3-213ENST00000492506 TMCO5BA8MYB1 307 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 POLR3GO15318 223 aaPredicted RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 TLR5O60602 858 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 CILPO75339 1184 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 ERLIN1O75477 346 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 BEST1O76090 585 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 ZIC2O95409 532 aaPredicted RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 ATXN1LP0C7T5 689 aaKnown RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 DLATP10515 647 aaKnown RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 LMAN1P49257 510 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 MYL6P60660 151 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 ETF1P62495 437 aaKnown RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 TNNC1P63316 161 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 CAMK2BQ13554 666 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 ENPP2Q13822 863 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 PSMD6Q15008 389 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 SNRNP35Q16560 246 aaKnown RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 ERCC6LQ2NKX8 1250 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 FUT11Q495W5 492 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 LARP1BQ659C4 914 aaKnown RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 KIAA1324Q6UXG2 1013 aaKnown RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 TPGS1Q6ZTW0 290 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 LUZP1Q86V48 1076 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 FUKQ8N0W3 1084 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 CADM4Q8NFZ8 388 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 SETD7Q8WTS6 366 aaKnown RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 SCFD1Q8WVM8 642 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 COL26A1Q96A83 441 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms